| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2684 |
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| Symbol | |
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| ID | 6116983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3286063 |
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| End bp | 3287178 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641634215 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001761055 |
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| Protein GI | 170727029 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAA GAGAAGTGAT ACGTCTTAAT GAAGCATTAA TTGTACAATC CAACGCTGAA
ATAGTGAAGG GATTTGGCTG GTTTGTGCAC TTTTCATGTA TCTTCTTTCT CTTTATCGCC
GTTATTAGCC TATTGAAGGT CGACACCAAT GCCAACAGGG ATTACCTGCA GATAGTCTTT
GGTGTGAGTG GCGCCGTTTT TGTTATTTCC TATCTTCGCA TCGCCATCAA AAAGTTTAAC
TATGACGATC TAAAACTGGC TTACATCAAT CTGTTTTTTA TCTTATTTGC TTGGCTACTG
CTAATGCTGG GTTTAATTGC GGTTGGTGAT GAGTTTTGGC CATATGTCGA TTTTATTGCT
TTTACCTTGT TGATCTCCCT ACTGACCTGT TTCTATCCCA ATAGCCGATT TTTCTACAGT
GGCTTACTAT TTATCTGCTT GTCCATGGTT ACCATGCACC TCTATATTCG AAATGAAGAT
ATCTTGATGT TTCTTGGGAG CTACCTGATC GTAAGCTTTG TGCTAAATTG TTGTCGAGTT
TCGTTCGCCC AACATTTTTA CGATGGATTA GCTAGCCAAC ATGAGAATAC ATTACTGCTG
TCAAAGTTAG AGAATCTAGC TATGCGAGAT GGCCTGACTG GGATCAATAA TCGCAAATAT
CTCGATGACA GGCTCAATAT TGAGATTAAG CGGGCTAAAC GGTGTGGTAA GCCTTTGAGC
ATGATCTTAT TGGATGTGGA TCATTTTAAA CGTTATAACC AGAGTGTAGG CCATCAAGCT
GGAGATCTGT GCTTAATTGA TATTGCTAAC CTTATACAGG GCTGCATTCA ACGGCCCGAT
GATATGCTTG CCAGATACGG TGGTGAAGAG TTTGCGATAT TGCTACCGGA CACAGGATTA
GAGTCGGCGG TTAGAATTGC TAAAAAAGTA CAAACAAAAC TCAAAGAGGC TAAAATATTG
CATCCAGACT CCCCCTTAAG TGGGTGGACG ACGCTGTCGC AGGGGATCAC AGTGTGGGAG
CAAGGGATGA GTGCCAATAT TTTTTTAAAG CAGGTTGATA AGGCACTCTC TGATGCTAAA
CTTGCTGGGC GAAACTGTTA CGTTGTCTAC TCTTGA
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| Protein sequence | MKQREVIRLN EALIVQSNAE IVKGFGWFVH FSCIFFLFIA VISLLKVDTN ANRDYLQIVF
GVSGAVFVIS YLRIAIKKFN YDDLKLAYIN LFFILFAWLL LMLGLIAVGD EFWPYVDFIA
FTLLISLLTC FYPNSRFFYS GLLFICLSMV TMHLYIRNED ILMFLGSYLI VSFVLNCCRV
SFAQHFYDGL ASQHENTLLL SKLENLAMRD GLTGINNRKY LDDRLNIEIK RAKRCGKPLS
MILLDVDHFK RYNQSVGHQA GDLCLIDIAN LIQGCIQRPD DMLARYGGEE FAILLPDTGL
ESAVRIAKKV QTKLKEAKIL HPDSPLSGWT TLSQGITVWE QGMSANIFLK QVDKALSDAK
LAGRNCYVVY S
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