| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2661 |
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| Symbol | |
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| ID | 6116960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3256702 |
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| End bp | 3258327 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634192 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001761032 |
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| Protein GI | 170727006 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000865937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT TACTCAATGA TATAGAGATA GATCTTAAGC TAGGATATGT GATTAAACTA
GGTGTGAAGC ACTCTGTTCG AGCTAAGACC TTACAGGTTC TCGCTTACCT GATTGAACAC
GACCAAGAGG TGGTAACAAA GCAAAGTTTG CTCGATACGA TCTGGCACGA TGTGGTGGTG
CAAGAGCAAG TATTAGTACA ATCAATTAAA GAGATCCGTG ATCTGCTGGG AGCAGAGGTG
ATCAAAACTT ATCCTCGCCA AGGTTACTGC TGGGTTGCTG ACACTACGCC GTTAACTCGC
TTAAACTCAC TGTTCCTGTT TAAACAATCA AGAGTTGTGA AATACCTGTC ATGGGTTAGT
GTTGTTTTTT CTATCATTTT TATCTGCATA TTGGCTTGGC GTTATCAACT CTTAGATAAA
GCTAATTTAA GTGTTGCCTT TTTACCTGTT GAAAATGCCA TGCCTGATAA CCAGCATCAA
TGGGTGCCGC TACAGGGAAT GGACTATCTC ACTCAAGCAT TATCAAAACA AAGTTCATTA
ACTGTGATCG ATAGCGATCA CCTGCTTTAT GGCTTTGAGC GACTTTCACA GAGCAGTACG
CTTATGCTTA GTGAAGGGGA GATTGTTCCC TTGAGACAAA AGGTGGGGGC TGAATTAATA
GTACAGACTC GATTAACAGG ATTCCCTCAG GATTTTCAAC TACATTACAC GCTATTTTTT
CCCCACGGAG TTGAAAGGGG AGTGGAGTTA GCAAGTTCAG TAACAGGAGC TTATGACAAA
CTCGTTGAGC GGATCGCCAC TCGTTATGGC GAGTTTCAAC CGAACAGAAG AGTCAATTAT
CACAGTGACT TTAGTAATGA AGCTTTCGTT ACTGGCGTTG AGCATTACCT GAAACAGGAT
TACGCCAGTG CGATCCCTCT CTTGATGACA GCGTTAAACA TTGAGCCTGA ACTATTAGCA
GCAAGACGCT ATTTAGCGGC AAGTTATGCC AATACAAACG AGTTAGGCAG TGCATTTTCG
CTGTTACAGC AAAATATTAT TGAAGCGGAA AAGGTCAGTG ATAATCGTGA AGCGTTGCGG
GCCTATTTGA TGGTAGGGTA CTTAAAAATT AATTGGCCAG TGAGTTCCGA TAGAGAGCAA
GAGTTGCTAA GTGCAGAGCA GCATATTAAT CAAGCTCAGC AACTGGCTCG TAAAGTCGTC
GATAAGCTGT TTATTGCTTA CTCCTATGAG GAGCTTGGAA AGATCAAACG CTTACAAGGT
CGCTACAGCG AAGCAAGTCG ATTACTTAAC TTGGCATTAG AGTACCATCA AGAGTTTCAT
GGCAGCTATG GACAAACAGC CGCTCTTATT GAACTTGCCA AGGTTGCAGC TGAGCAGAAA
GAGGAGGATG AAAGCCAAAG GTACCTTGCT CATGCATTGA ATATTGCTGA GACAAATGAT
GCTCCGGCTA ATCAGATCTG GGTTTTACTG GCTAAGGCAG AGCTTGCCCG TAGACAGCAC
AATGAATTAT TGGCTAAACG TTGGGCCCGC CAAGCGATGG AGGTTGCAGA GCACAATGAC
AACCCCCATC TCATTACACG GGTCAATGCT TGGTTTGAGC ATAAACCTGT CTATACTGTC
AATTAA
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| Protein sequence | MRYLLNDIEI DLKLGYVIKL GVKHSVRAKT LQVLAYLIEH DQEVVTKQSL LDTIWHDVVV
QEQVLVQSIK EIRDLLGAEV IKTYPRQGYC WVADTTPLTR LNSLFLFKQS RVVKYLSWVS
VVFSIIFICI LAWRYQLLDK ANLSVAFLPV ENAMPDNQHQ WVPLQGMDYL TQALSKQSSL
TVIDSDHLLY GFERLSQSST LMLSEGEIVP LRQKVGAELI VQTRLTGFPQ DFQLHYTLFF
PHGVERGVEL ASSVTGAYDK LVERIATRYG EFQPNRRVNY HSDFSNEAFV TGVEHYLKQD
YASAIPLLMT ALNIEPELLA ARRYLAASYA NTNELGSAFS LLQQNIIEAE KVSDNREALR
AYLMVGYLKI NWPVSSDREQ ELLSAEQHIN QAQQLARKVV DKLFIAYSYE ELGKIKRLQG
RYSEASRLLN LALEYHQEFH GSYGQTAALI ELAKVAAEQK EEDESQRYLA HALNIAETND
APANQIWVLL AKAELARRQH NELLAKRWAR QAMEVAEHND NPHLITRVNA WFEHKPVYTV
N
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