| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2626 |
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| Symbol | |
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| ID | 6116925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3211461 |
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| End bp | 3212936 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634158 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001760998 |
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| Protein GI | 170726972 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0112575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACG AAGGAAAAAT GAATCTGCTC AATTTTGCAG ATCCAAAAAT AAAAATGCTT
CATGTAACAT GGTTCGCTTT TTTCTTGTCT TTTGTCGTCT GGTTTAGTCA CGCCCCCTTG
ATGGTATTTA TTAAAGAAGC GTTTGACCTA ACGAGCGCGC AGGTAAAAGC CTTACTCATC
TTAAACGTTG CGCTTACCAT ACCTGCTCGC ATTGTGATCG GGATCTTAGT TGATAAATAT
GGCCCCAGAA TTATTTACAG TAGTTTGCTT ATCATCTCTT CATTTATCTG TCTCGGCTTT
GCTATGGCCC AAAGCTTTGA GCAACTAGCC CTATTCAGGT TTCTCTTAGG CTTTGTGGGC
GCAGGCTTCG TGATTGGAAT TCGACTCGTT GGTGAGTGGT TCCCAGCAAA ACAGGTCGGC
ATTGCCGAAG GGATCTATGG CGGCTGGGGA AACTTCGGCT CTGCCGCTGC GGCAATGTCA
CTGCCAACGT TAGCTTATGC ATTTGGTGGT GATGATGGAT GGCGCTACGC CTTAGCGTGC
ACTGGGATTT TAGCGGGTCT ATACGGCATA TTCTTCTACA TTGCAGCCCG AAATACGCCA
AAAGGCTCCA CCTACTTTAA GCCAAAAAAG TCTGGTGGTT TGGAGGTCAC AAGTTGGAAA
GACTTCTACT TTTATCTGTT TATGAATATC CCCATGTATA TCGCCCTCGC CGTGCTGGCT
TGGAAATTAT CACCTACAGG GGTGAACCTG TTTACCACTG AAACCATGTA CATCATGTGG
TTGTCACTCT TAGTGTTATT TTTTATTCAG GTTAACTCTA TCTGGCGAGT CAATAAGGAG
AACCTGACCC ATGGCGTTCC TAACATTGAG AAGTATGAGT TTAAACAAGT TGCTATTCTC
GATGTCGCCT ACTTTGTTAC CTTCGGCTCA GAGCTTGCGG TAGTCTCCAT GCTACCTCTG
TTTTTCTTAG AAACATTTGA CGGGCTAGAT CCAGTAAAAG CAGGTTTATT GGCCTCAGGC
TTTGCCTTTA TGAACTTGGT CGCTCGCCCT ACTGGTGGCT GGTTTAGTGA TAAGTTTGGA
CGACGTAAGA GCTTGATGAT CTTAGTCGGT GGCTTAGCAG CTGGTTATGC CATACTCAGT
CAAGTCGATG GCAGCTGGTT TATCCCCCTT GCGGTCATGG CAACCATGGT CTGCTCCTTT
TTCGTTCAAG CAGGCGAAGG TGCTGTTTTT GCCATAGTGC CACTGGTCAA GCGTCGCATG
ACAGGCCAGA TTGCTGGTAT GGCAGGTGCC TACGGCAATG TTGGTGCGGT AACCTACCTA
ACGGTTTTAT CTTTTGTGGA TTACAGCACC TTCTTCTTGG TCATATCAGG CTCAGCTCTG
TTTATCTTTA TTGCAACTAT GTTCCTCAAT GAACCTAAGG GACATATGGC AGAGGTGAAC
GAAGATGGCA CGGTAGAACT TATTGATGTG AATTAA
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| Protein sequence | MSNEGKMNLL NFADPKIKML HVTWFAFFLS FVVWFSHAPL MVFIKEAFDL TSAQVKALLI
LNVALTIPAR IVIGILVDKY GPRIIYSSLL IISSFICLGF AMAQSFEQLA LFRFLLGFVG
AGFVIGIRLV GEWFPAKQVG IAEGIYGGWG NFGSAAAAMS LPTLAYAFGG DDGWRYALAC
TGILAGLYGI FFYIAARNTP KGSTYFKPKK SGGLEVTSWK DFYFYLFMNI PMYIALAVLA
WKLSPTGVNL FTTETMYIMW LSLLVLFFIQ VNSIWRVNKE NLTHGVPNIE KYEFKQVAIL
DVAYFVTFGS ELAVVSMLPL FFLETFDGLD PVKAGLLASG FAFMNLVARP TGGWFSDKFG
RRKSLMILVG GLAAGYAILS QVDGSWFIPL AVMATMVCSF FVQAGEGAVF AIVPLVKRRM
TGQIAGMAGA YGNVGAVTYL TVLSFVDYST FFLVISGSAL FIFIATMFLN EPKGHMAEVN
EDGTVELIDV N
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