Gene Swoo_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2601 
Symbol 
ID6116898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3179130 
End bp3179897 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content45% 
IMG OID641634131 
Producthypothetical protein 
Protein accessionYP_001760973 
Protein GI170726947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0731507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.648058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGTAA GTAAACGTCT AATCGTCGCA GCACATCTTC TAAGCGCCAG CTTCACCCTT 
GCGGCTGCCC CAACACCTTT AACACCACAA ACGGCTGAGT ATCAAGTTAA TTATGGCAAC
ATCGAACTTG GTAAAGCCCG CTATCAGCTT CCTGTCGCCG AAGACAATGT CTATCAATAT
CGTTTTGACA GCGATGTAAG CCTACTTGTC CTTTCTGACA GGAGGAATGT GCGCAGTGAA
TTTACCTTAG ATGGTGATCA ACTCACGCCT ATGCGTTATA CCCATAACCG TAAAGGTACT
GGTCCAAGTT TTCAGGAGCA AACCGCCTTC GCCAAGGGGC AGTCAGTAGT TCACAGTCGC
TATAAAGATG AGCGAGCTAA ACTCCCCTAC ACAGAAGTGT TATATGATCC CCTCATGGCG
CAACTTCAAT TCCGACTCGA TATGGTTAAA GGAAAAAAAG AGCTCCACTA CGCCATGGTA
AAAGAGGGGG AAATAGATGA ATATGATTTC CGCGTTGTCG GCAAAGAGCG CATGAACATT
GACAGTGGCA GCTACGAAAC CATCAAGATT GAAGTGGTAA GAGACAGCAA AAAACGTCAA
ACATTTTTCT GGATGGCACC GGATCTAGCC TATCTTCCTG TACGTCTTAC TCACTTTGAA
AAGGGCAGCA AACAGTTAGA TATTAAACTA TTAAGCTATC GATTCTCCGA ACCACAACAA
GACCTCACAT CTGTATCTTC TAAGCCACAG CCCACAACAC ATCCATAA
 
Protein sequence
MSVSKRLIVA AHLLSASFTL AAAPTPLTPQ TAEYQVNYGN IELGKARYQL PVAEDNVYQY 
RFDSDVSLLV LSDRRNVRSE FTLDGDQLTP MRYTHNRKGT GPSFQEQTAF AKGQSVVHSR
YKDERAKLPY TEVLYDPLMA QLQFRLDMVK GKKELHYAMV KEGEIDEYDF RVVGKERMNI
DSGSYETIKI EVVRDSKKRQ TFFWMAPDLA YLPVRLTHFE KGSKQLDIKL LSYRFSEPQQ
DLTSVSSKPQ PTTHP