| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2524 |
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| Symbol | |
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| ID | 6116808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3084972 |
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| End bp | 3086246 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634041 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001760896 |
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| Protein GI | 170726870 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTTG TTAATTTCAC TCAGCAAGGC GGGGTCTTAG GCTGCGATAT TAATGCAGAT
TGGCGTTTGA AGGACAGAAG TGGAGGAGTG AAACCTCAAC ACTGCCGGAT CATGTGGGTT
GACGATCAGT TCTGCCTAGA AGATCTCTGT GGTGAGGTGT TCGTTAATAA CTCCTCTTTG
CCTATCGGTC TGGGTCGATT TGCCAGTTTA AATGAGAATG ATGAGATAAA AATTGGACCC
TATAAAGTTA GGATCTCATT GGGGTTAAGC TCAGATCCTA CCGCAAGTAT GACTAAGCGT
TTTTCTGAGA TGTTCAGTGA AAATGACCTG CCGGGCCTAA TGAAAGAGCC TGTTTCACAG
GTAGCTGAAC ATAGTGATGA CACTTCTATT GACGATCCTA TGTTGGCGCT AGATGCATTA
CAGAATCGCA GCGGGGAAAA CATATTGAGT TTTGACTCCA GGAAAGAGAA GAAACTTGAT
GATATTGACT TAATCGATAC AGACATATCG ATAAGTGACA GAGAGATAAC CATGCAAGCT
GATTCGGAAT ATACACAAGA TTCCGCGATT GCATTGAAGA AACATACTGA ATTGGATGGA
TTTACCATGG ACGAAAATAC CTTAGACTTG TTGGAATCTG AACTACACGC AGGGCTTGAT
AAACAAGGCG AGCAATTAGG GGAACATATT ACCACTGGCC CGTTATTTAG AGGTTTGGGG
GTGCAAATTG GCTCATCGCA AAATAGTGAA CAGATGCAAG ATCTATCAGT GGATCTTGGC
GCCGCGCTAA AATCTGCCAT TACAGGGCTA CTCTCATTGC ACCACACAGC AAATCATAGC
CGCTATGAGT TAATGAATAA GAATCTTCAA CCTATTGAAG ATAACCCACT GAGATTAGGG
CTAGGTTATG AGGACACGGT GAAAACGCTG TTTGCTCATG ATAGAAGTCC AGTTCATCTC
TCATCGGCCG CCGCCATTGC GGAGAGCCTT AAGTCTATTG AACATCATAA TGAGGCTGTT
CAGTCGGCTA TCACAGAAGC GTTAGATTAC ATCTTAGGGG CATTTTCTCC CGCTAAATTA
TTAAAGCGTT TTGCGCAATA TCGTAAGTCC AGCGATCTTA ATCTAGATAC AGGCGATAAA
TGGGCTTGGT CTATGTACGA GCAGTATTAC GAAGAGTTGA CATCTAATCG TCAGAAAGGG
TTTGAAAAAC TGTTTTGGGA GGTGTTTGAG CAAGCCTACG ACCGTAAATT ACGTGAACTT
CAAAAGGATT TTTGA
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| Protein sequence | MPFVNFTQQG GVLGCDINAD WRLKDRSGGV KPQHCRIMWV DDQFCLEDLC GEVFVNNSSL
PIGLGRFASL NENDEIKIGP YKVRISLGLS SDPTASMTKR FSEMFSENDL PGLMKEPVSQ
VAEHSDDTSI DDPMLALDAL QNRSGENILS FDSRKEKKLD DIDLIDTDIS ISDREITMQA
DSEYTQDSAI ALKKHTELDG FTMDENTLDL LESELHAGLD KQGEQLGEHI TTGPLFRGLG
VQIGSSQNSE QMQDLSVDLG AALKSAITGL LSLHHTANHS RYELMNKNLQ PIEDNPLRLG
LGYEDTVKTL FAHDRSPVHL SSAAAIAESL KSIEHHNEAV QSAITEALDY ILGAFSPAKL
LKRFAQYRKS SDLNLDTGDK WAWSMYEQYY EELTSNRQKG FEKLFWEVFE QAYDRKLREL
QKDF
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