Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2515 |
Symbol | |
ID | 6116799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3071256 |
End bp | 3072461 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634032 |
Product | hypothetical protein |
Protein accession | YP_001760887 |
Protein GI | 170726861 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.59747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAACA CGAGTCGTAA ACTGGACTGC TTTAATCTTG CATCTGAATT AACAGAGCTT AGGAATAGCG CTGCTTATCA ACAAATGAGA GTCGAGATCA ATCGACGTAA CAACCCACTG AGCGGTGGAA CCGACTGGGA GAAGGTGTAT CAACTCGCCC TGCAAATTTC ATCGGGATTG GGGGCCGACC TATTAACCTC TGCATACTTC GTTACGGCTG CATCGAAAAC ACGAGGGGTG TCAGGTCTTG CCTCAGGCTT AGATTTGATG CTGTCGGTCG TTTCCTTCTC CACGGAGTTA GCTCAACTCC CCAGTGAAAA AGTATCTGAG ATCATCAACT GGGCTGTGAC TAAGGTGACT CCAGAAATAA AGAAGATGGC GGTCACATCA TCGAATGTAC GTGACTGGTA TCGCTGTGAA CATGCTTGTC AGAAGTTATT TGAGTTGATC ACTCAAAAGC AGCCTCAACA GGTACCTAAT CTAGATGTGT TGGGGTATCT CATTTTCGAA AAGATCGATC TACTTGAAAC CAATAAAGTG AGTGTGTTGC CCAGCTCAGC TTCAAATACA GTACCGGTTA AGGTAAAAGC TAGACGTTGG CCCTTATGGG CTCTGAGTAG CTTAATTGTT ATTTGTAGTC TGCTAAGCGG TTATCTGGCT GTACTTTACC ATCAAGAGGT GAGTGGAAAA TTACCGTTAT GGCTGTATCA AGCACCAGAA GAAAAGGTCG CCCCTGAGTC ATCGATTGCG CAGCGTATTG ATAGGGCATT TAGCTTGCCA CAGGGCGAGC CTTTAGTTTC TATCTATCCT GAACAAGTGA GCTTACTGGT TGAGTTAGAT AAAAATTATC AAAGGTTTGC TAACGCAAGA ACCATCATGG CTAATTTAAG CCAGCTTTCA CAGGCTTTGC CAGAAAGTAG CAATAAAATG AAGCAAGAAA CCCTCTCTAT TGCCCAATAT GCCAGCAGCT TATCACCTAT TTTAGGACGA ACTTATTACA TTGGGGATCT GTTAGAGGAC AAGGAGTATG CCAGGGCAGA AGTTGAACTT AATCAGTTGA ATAGCCAGTT AAAGGCTTTG TTGATAAAAA GAACCTTGCT TGCCCAACAG CTCCACAATC AACAGTCTGA TGAGTCTGGT ACACTGCAAC TAGAGCTAAG TTCTCAGCCT AGCAGTGACG TTATATCTCA AGATGGGGAG AGATAA
|
Protein sequence | MDNTSRKLDC FNLASELTEL RNSAAYQQMR VEINRRNNPL SGGTDWEKVY QLALQISSGL GADLLTSAYF VTAASKTRGV SGLASGLDLM LSVVSFSTEL AQLPSEKVSE IINWAVTKVT PEIKKMAVTS SNVRDWYRCE HACQKLFELI TQKQPQQVPN LDVLGYLIFE KIDLLETNKV SVLPSSASNT VPVKVKARRW PLWALSSLIV ICSLLSGYLA VLYHQEVSGK LPLWLYQAPE EKVAPESSIA QRIDRAFSLP QGEPLVSIYP EQVSLLVELD KNYQRFANAR TIMANLSQLS QALPESSNKM KQETLSIAQY ASSLSPILGR TYYIGDLLED KEYARAEVEL NQLNSQLKAL LIKRTLLAQQ LHNQQSDESG TLQLELSSQP SSDVISQDGE R
|
| |