Gene Swoo_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2515 
Symbol 
ID6116799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3071256 
End bp3072461 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content44% 
IMG OID641634032 
Producthypothetical protein 
Protein accessionYP_001760887 
Protein GI170726861 
COG category[S] Function unknown 
COG ID[COG3515] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.59747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA CGAGTCGTAA ACTGGACTGC TTTAATCTTG CATCTGAATT AACAGAGCTT 
AGGAATAGCG CTGCTTATCA ACAAATGAGA GTCGAGATCA ATCGACGTAA CAACCCACTG
AGCGGTGGAA CCGACTGGGA GAAGGTGTAT CAACTCGCCC TGCAAATTTC ATCGGGATTG
GGGGCCGACC TATTAACCTC TGCATACTTC GTTACGGCTG CATCGAAAAC ACGAGGGGTG
TCAGGTCTTG CCTCAGGCTT AGATTTGATG CTGTCGGTCG TTTCCTTCTC CACGGAGTTA
GCTCAACTCC CCAGTGAAAA AGTATCTGAG ATCATCAACT GGGCTGTGAC TAAGGTGACT
CCAGAAATAA AGAAGATGGC GGTCACATCA TCGAATGTAC GTGACTGGTA TCGCTGTGAA
CATGCTTGTC AGAAGTTATT TGAGTTGATC ACTCAAAAGC AGCCTCAACA GGTACCTAAT
CTAGATGTGT TGGGGTATCT CATTTTCGAA AAGATCGATC TACTTGAAAC CAATAAAGTG
AGTGTGTTGC CCAGCTCAGC TTCAAATACA GTACCGGTTA AGGTAAAAGC TAGACGTTGG
CCCTTATGGG CTCTGAGTAG CTTAATTGTT ATTTGTAGTC TGCTAAGCGG TTATCTGGCT
GTACTTTACC ATCAAGAGGT GAGTGGAAAA TTACCGTTAT GGCTGTATCA AGCACCAGAA
GAAAAGGTCG CCCCTGAGTC ATCGATTGCG CAGCGTATTG ATAGGGCATT TAGCTTGCCA
CAGGGCGAGC CTTTAGTTTC TATCTATCCT GAACAAGTGA GCTTACTGGT TGAGTTAGAT
AAAAATTATC AAAGGTTTGC TAACGCAAGA ACCATCATGG CTAATTTAAG CCAGCTTTCA
CAGGCTTTGC CAGAAAGTAG CAATAAAATG AAGCAAGAAA CCCTCTCTAT TGCCCAATAT
GCCAGCAGCT TATCACCTAT TTTAGGACGA ACTTATTACA TTGGGGATCT GTTAGAGGAC
AAGGAGTATG CCAGGGCAGA AGTTGAACTT AATCAGTTGA ATAGCCAGTT AAAGGCTTTG
TTGATAAAAA GAACCTTGCT TGCCCAACAG CTCCACAATC AACAGTCTGA TGAGTCTGGT
ACACTGCAAC TAGAGCTAAG TTCTCAGCCT AGCAGTGACG TTATATCTCA AGATGGGGAG
AGATAA
 
Protein sequence
MDNTSRKLDC FNLASELTEL RNSAAYQQMR VEINRRNNPL SGGTDWEKVY QLALQISSGL 
GADLLTSAYF VTAASKTRGV SGLASGLDLM LSVVSFSTEL AQLPSEKVSE IINWAVTKVT
PEIKKMAVTS SNVRDWYRCE HACQKLFELI TQKQPQQVPN LDVLGYLIFE KIDLLETNKV
SVLPSSASNT VPVKVKARRW PLWALSSLIV ICSLLSGYLA VLYHQEVSGK LPLWLYQAPE
EKVAPESSIA QRIDRAFSLP QGEPLVSIYP EQVSLLVELD KNYQRFANAR TIMANLSQLS
QALPESSNKM KQETLSIAQY ASSLSPILGR TYYIGDLLED KEYARAEVEL NQLNSQLKAL
LIKRTLLAQQ LHNQQSDESG TLQLELSSQP SSDVISQDGE R