Gene Swoo_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2505 
Symbol 
ID6116789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3055671 
End bp3057368 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content43% 
IMG OID641634022 
Product2-alkenal reductase 
Protein accessionYP_001760877 
Protein GI170726851 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.442514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAA TTATAGGCAT AGATCTAGGA TCAACAAACA GTTTGGTGTC CTATTGGGAT 
GGTGAGAAAG CGGTCATCAT CCCCAATGCA TTTGGCGATA ATTTAACGCC CTCGGTTGTT
GGCTTAGATG ATAACAATCA AGTCTTAGTC GGTGCAGTTG CCAAAGAGCG ACTTATTACT
CACCCCCATA AAACAGCGGC AATTTTTAAG CGTTATATGG GCTCCGATAA AATTTATGAT
TTTGGTAGCG AGACTCTGTT CCGTCCAGAA GTTCTCTCAT CTTTTGTGTT GCGTGAACTT
AAGACGGATG CTGAAGTCTT TTTGGGACAA CCTATTGCAG AAGCCGTTAT AAGTGTTCCT
GCCTATTTTA GCGATCAACA GAGAAGAGCC ACGCAGGTAG CGGGGGAGTT AGCGGGTCTA
AAGGTTGAAA GATTAATTAA TGAGCCTACC GCAGCTGCGC TTAGTTATGG ATTACACCGT
CAAGATGAGG AGTGCAGCTT TCTTATCTTT GATTTAGGTG GCGGGACATT CGATGTCTCT
GTTTTGAGCC TAATTGCGGG AATTATGGAG GTCAATGCTA CCGCTGGCCA TAATGCATTG
GGTGGTGAAG ACTTTGTAGA TTTGATGTTG GAATCATTTA TTCAAACTCA CCAGCTTGAT
GTGTTGGCAT TAAAAGAGAG AAGTAAGCTT AGGTGGAAGA TAGAGCAGCT CAAGCGTGCG
TTAACGAATA ACAATCAAGC CAGTTTTGAG ATTGAGCTAA ATCATAGAGA GCTATCTTGG
TGTTTAAACC GTGATGAATT TGAACAACTA TCAGCACCGT TAATAAACTG CATTCGCCAA
CCCATTGAAC GTGCATTAAA CGATGCTGCA ATGTCTCCTT CCGATCTTAA AGAGATCATT
CTTGTTGGCG GCGCAACGCG TATGCCTATG GTTCGCTCAC TAGTGGCCAA GATGTTTGGT
CGATTGCCCA CAAGTCACCA TAATCCTGAT GAGGTTGTAG CCCTTGGCGC CGCAGTACAA
GCAGGACTCA AGGCGCGCGA TGCTACGTTA TCTGATGTGG TGCTTACCGA TGTGTGCCCC
TATTCATTAG GAGTTGAAAC GGTGAGAACG ACAAGAGATC AGCAATATGA AGCAGGCTTT
TATACGCCGA TTATTGAACG TAATACGGTG ATCCCTGTGA GTAGAGAAGA GGTTTTTTCA
ACTTGCTTTG ATAATCAACC AAGCATGTGC TTGTGTATCT ATCAAGGAGA GAGCCGTTTG
GTACGGGATA ACATTAAGCT TGGAGAGCTT ATTATTGATC TCGAACCCGC TCCCACAGGT
GAACAACTGG TTACTGTCCG TTATACCTAT GACATTAATG GTATTTTAGC TGTGGATACT
TGCGTTCAAT CAACGGGGAA ACGAGAAAAT TTAGTGATAA AAAACGATGA CTGCCATCTT
TCTGATACGG AGGTTAGAGC GCGTTTACTT GAGCTAGAAA CACTTAAAAT CCACCCTAGG
GACAAACTCG ACAATCGCAT GCTTATAGCC AGAGGTGAGC GTTTATTTGA ACAATCATTA
GGAGAGACTC GAGAGCTAAT TAGTGAGCGA CTTTTGCAAT TTGAGAGGTT AGTCAATGAG
CAAAACCCTA AAGAGATCAA ACGGGCATTA GTTAGGATAA ATGATGAGTT TTCTCAAATT
GAACTTAAAA GGATTTAA
 
Protein sequence
MSLIIGIDLG STNSLVSYWD GEKAVIIPNA FGDNLTPSVV GLDDNNQVLV GAVAKERLIT 
HPHKTAAIFK RYMGSDKIYD FGSETLFRPE VLSSFVLREL KTDAEVFLGQ PIAEAVISVP
AYFSDQQRRA TQVAGELAGL KVERLINEPT AAALSYGLHR QDEECSFLIF DLGGGTFDVS
VLSLIAGIME VNATAGHNAL GGEDFVDLML ESFIQTHQLD VLALKERSKL RWKIEQLKRA
LTNNNQASFE IELNHRELSW CLNRDEFEQL SAPLINCIRQ PIERALNDAA MSPSDLKEII
LVGGATRMPM VRSLVAKMFG RLPTSHHNPD EVVALGAAVQ AGLKARDATL SDVVLTDVCP
YSLGVETVRT TRDQQYEAGF YTPIIERNTV IPVSREEVFS TCFDNQPSMC LCIYQGESRL
VRDNIKLGEL IIDLEPAPTG EQLVTVRYTY DINGILAVDT CVQSTGKREN LVIKNDDCHL
SDTEVRARLL ELETLKIHPR DKLDNRMLIA RGERLFEQSL GETRELISER LLQFERLVNE
QNPKEIKRAL VRINDEFSQI ELKRI