Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2505 |
Symbol | |
ID | 6116789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3055671 |
End bp | 3057368 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634022 |
Product | 2-alkenal reductase |
Protein accession | YP_001760877 |
Protein GI | 170726851 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.104768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.442514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAA TTATAGGCAT AGATCTAGGA TCAACAAACA GTTTGGTGTC CTATTGGGAT GGTGAGAAAG CGGTCATCAT CCCCAATGCA TTTGGCGATA ATTTAACGCC CTCGGTTGTT GGCTTAGATG ATAACAATCA AGTCTTAGTC GGTGCAGTTG CCAAAGAGCG ACTTATTACT CACCCCCATA AAACAGCGGC AATTTTTAAG CGTTATATGG GCTCCGATAA AATTTATGAT TTTGGTAGCG AGACTCTGTT CCGTCCAGAA GTTCTCTCAT CTTTTGTGTT GCGTGAACTT AAGACGGATG CTGAAGTCTT TTTGGGACAA CCTATTGCAG AAGCCGTTAT AAGTGTTCCT GCCTATTTTA GCGATCAACA GAGAAGAGCC ACGCAGGTAG CGGGGGAGTT AGCGGGTCTA AAGGTTGAAA GATTAATTAA TGAGCCTACC GCAGCTGCGC TTAGTTATGG ATTACACCGT CAAGATGAGG AGTGCAGCTT TCTTATCTTT GATTTAGGTG GCGGGACATT CGATGTCTCT GTTTTGAGCC TAATTGCGGG AATTATGGAG GTCAATGCTA CCGCTGGCCA TAATGCATTG GGTGGTGAAG ACTTTGTAGA TTTGATGTTG GAATCATTTA TTCAAACTCA CCAGCTTGAT GTGTTGGCAT TAAAAGAGAG AAGTAAGCTT AGGTGGAAGA TAGAGCAGCT CAAGCGTGCG TTAACGAATA ACAATCAAGC CAGTTTTGAG ATTGAGCTAA ATCATAGAGA GCTATCTTGG TGTTTAAACC GTGATGAATT TGAACAACTA TCAGCACCGT TAATAAACTG CATTCGCCAA CCCATTGAAC GTGCATTAAA CGATGCTGCA ATGTCTCCTT CCGATCTTAA AGAGATCATT CTTGTTGGCG GCGCAACGCG TATGCCTATG GTTCGCTCAC TAGTGGCCAA GATGTTTGGT CGATTGCCCA CAAGTCACCA TAATCCTGAT GAGGTTGTAG CCCTTGGCGC CGCAGTACAA GCAGGACTCA AGGCGCGCGA TGCTACGTTA TCTGATGTGG TGCTTACCGA TGTGTGCCCC TATTCATTAG GAGTTGAAAC GGTGAGAACG ACAAGAGATC AGCAATATGA AGCAGGCTTT TATACGCCGA TTATTGAACG TAATACGGTG ATCCCTGTGA GTAGAGAAGA GGTTTTTTCA ACTTGCTTTG ATAATCAACC AAGCATGTGC TTGTGTATCT ATCAAGGAGA GAGCCGTTTG GTACGGGATA ACATTAAGCT TGGAGAGCTT ATTATTGATC TCGAACCCGC TCCCACAGGT GAACAACTGG TTACTGTCCG TTATACCTAT GACATTAATG GTATTTTAGC TGTGGATACT TGCGTTCAAT CAACGGGGAA ACGAGAAAAT TTAGTGATAA AAAACGATGA CTGCCATCTT TCTGATACGG AGGTTAGAGC GCGTTTACTT GAGCTAGAAA CACTTAAAAT CCACCCTAGG GACAAACTCG ACAATCGCAT GCTTATAGCC AGAGGTGAGC GTTTATTTGA ACAATCATTA GGAGAGACTC GAGAGCTAAT TAGTGAGCGA CTTTTGCAAT TTGAGAGGTT AGTCAATGAG CAAAACCCTA AAGAGATCAA ACGGGCATTA GTTAGGATAA ATGATGAGTT TTCTCAAATT GAACTTAAAA GGATTTAA
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Protein sequence | MSLIIGIDLG STNSLVSYWD GEKAVIIPNA FGDNLTPSVV GLDDNNQVLV GAVAKERLIT HPHKTAAIFK RYMGSDKIYD FGSETLFRPE VLSSFVLREL KTDAEVFLGQ PIAEAVISVP AYFSDQQRRA TQVAGELAGL KVERLINEPT AAALSYGLHR QDEECSFLIF DLGGGTFDVS VLSLIAGIME VNATAGHNAL GGEDFVDLML ESFIQTHQLD VLALKERSKL RWKIEQLKRA LTNNNQASFE IELNHRELSW CLNRDEFEQL SAPLINCIRQ PIERALNDAA MSPSDLKEII LVGGATRMPM VRSLVAKMFG RLPTSHHNPD EVVALGAAVQ AGLKARDATL SDVVLTDVCP YSLGVETVRT TRDQQYEAGF YTPIIERNTV IPVSREEVFS TCFDNQPSMC LCIYQGESRL VRDNIKLGEL IIDLEPAPTG EQLVTVRYTY DINGILAVDT CVQSTGKREN LVIKNDDCHL SDTEVRARLL ELETLKIHPR DKLDNRMLIA RGERLFEQSL GETRELISER LLQFERLVNE QNPKEIKRAL VRINDEFSQI ELKRI
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