| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2412 |
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| Symbol | |
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| ID | 6116686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2958510 |
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| End bp | 2959412 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633920 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001760785 |
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| Protein GI | 170726759 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.11495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000153595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAATATA ATGCGCTAAA TAGATTCGAC AAAGTGGTTG CCATTGGTGG TGGCCACGGC
TTAGGCAGAG TGCTGTCAAC ACTCTCATTT CTTGGCCCTA AGCTCACAGG TATCGTTGCA
ACAACAGATA ATGGTGGCTC CACAGGCAGG CTTAGACAGC AGCAAGATTG TATCGCTTGG
GGCGACCTAC GTAACTGTTT ATCCCAATTA GCAAGTACGC CCTCTATTGG TTCCTTGTTG
TTCGAATACC GTTTTGCTGG TGAGAGTGAT CTGTCGGGCC ACAATCTGGG TAATCTCATG
TTGCTTGCTT TAGATGAGTT ATGTGTCAGA CCACTTGAAG CAGTGAATAT CGTACGCCAG
TTTCTCAATA TTGAAACTCG CGTTATTCCT ATGTCTGAGG AGCCAACACA TCTGGTAGCC
ATCCAGGCGT GCGGTAATAA AATATTTGGT GAGACCAGTG TCGATGAGAT GTCAGAACAC
CCTATGGCAT TGTCGTTAGA GCCGGCAGTA GCAGCGACCT GTGAAGCTTG TGATGCGGTG
CGAGAGGCAG ATCTGGTGAT ATTAGGCCCT GGTAGCTTTT TGACCAGCAT TATGCCACCA
CTGCTTCTGC CAAAATTTGC TGCAGCATTG GCAGAATCGA ATGCTGAGGT GATCTTAATT
GATAATCTTA CCCGTGAACC CTCCTCCTCT GCTGATTTCT CTTTAACCCA AAGAGTTGAT
TGGTGTCATC AGGTGTTAGG AGTCAAGATC ATAGATAGGA TATTAAGTCA CTCAGAGGTG
AGCTACCAAA GTGGTAATAT CCTCTATCGC CCCTTGGTGA GTAAACACCA CAAAGGCCTA
CATGATAGGA AGGCATTGGC ACAAGCCCTT GCCAGTATCG TGTCTGACAC GATAACCAAT
TAA
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| Protein sequence | MQYNALNRFD KVVAIGGGHG LGRVLSTLSF LGPKLTGIVA TTDNGGSTGR LRQQQDCIAW
GDLRNCLSQL ASTPSIGSLL FEYRFAGESD LSGHNLGNLM LLALDELCVR PLEAVNIVRQ
FLNIETRVIP MSEEPTHLVA IQACGNKIFG ETSVDEMSEH PMALSLEPAV AATCEACDAV
READLVILGP GSFLTSIMPP LLLPKFAAAL AESNAEVILI DNLTREPSSS ADFSLTQRVD
WCHQVLGVKI IDRILSHSEV SYQSGNILYR PLVSKHHKGL HDRKALAQAL ASIVSDTITN
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