Gene Swoo_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2387 
Symbol 
ID6116658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2927437 
End bp2928498 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content39% 
IMG OID641633893 
Producthypothetical protein 
Protein accessionYP_001760761 
Protein GI170726735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAC TCCCTAAAGA GGAGACTGGT GTCCGTTTTC AAAAAATAAT CAATTCGCCA 
ATCAATCTAT TGCTTGGTAG CTTCCTGTCA CTGCGCAGCT ACTATCAAAA AATGGTAAGT
TTACTTAAAC GGTTAACACT TGCTCAGAAA CTCTATCTGT TTGCGCTATT GCTATTAATG
TCACCTGATT ACCTTGGATT AGTGGTCATT ATTACCGTAG TGGCACTGAC GTTAGAGTTT
TGGCCACTGT TCGAACGTGT CTGGCATAGC TTGTCAGGTA AAGCTGTGTT GTTGCTTTTT
TATGCCGTAA TCGCAAACTT TGCAATAGCC GGAGCGGCCT CTGTTGTTAA TGAAGTTGTA
GGCGTTTCAA CTACTCACTT CTCATATACA CATAATTTTG CCATTTTGCT TTATCTACCG
GCTTGGGTAA TTGCAATGAC GGCATTGGCG ATACTCTTAC TCCAAATTGC TGTTCCCATT
TATCTTGTCT TTTTACTTAT GCTGAAACCT TTTGGGGTTA AAGGGCTTAG GTTAACCAAC
CATAACCATT TTCGGTTTTC AACCATGCTA GTACGTGTGA TATTAGCTTC AATTGTTCTT
TATCATTTAG TCTTACTCGT TAATTTAGAT AATGAACTCA GTGATGAAGT CGCCTTTACC
GAAGAGAGTG ATGCAGTTGC TGTTGCTGTT GCTGAAAATG TTCACAATCA ATTAATAGAA
TCTTTTAATC AAACAGAGGG ATTACCCGTC GAATTGAGCT CAATGAGTGA TAACTTGTCC
ATTGGTTTAT CTCTTTCTTC AGAAGAGACT AAAAAATCAA ATGAAGAACT ATATGAAAAT
GTACGTTCTG ACTATGAAAA AGTAGTGCGT AATCTTATCG CTATATTCGC TTTTCATCTA
GAGTCTGATA CGAAATCACG GTGTGAAATG GAACAAGATA CCAACGTGGT GGAGCTCAAT
GATTATGAGA TCTTAGAGAT AAAAGAGGAC CTTGAAGCTG ATTATGGTTA CAGTTTTGTG
GTAAAAAAAT GCATATCTCC CGCATTTCCA GCAGTGAACT AG
 
Protein sequence
MEQLPKEETG VRFQKIINSP INLLLGSFLS LRSYYQKMVS LLKRLTLAQK LYLFALLLLM 
SPDYLGLVVI ITVVALTLEF WPLFERVWHS LSGKAVLLLF YAVIANFAIA GAASVVNEVV
GVSTTHFSYT HNFAILLYLP AWVIAMTALA ILLLQIAVPI YLVFLLMLKP FGVKGLRLTN
HNHFRFSTML VRVILASIVL YHLVLLVNLD NELSDEVAFT EESDAVAVAV AENVHNQLIE
SFNQTEGLPV ELSSMSDNLS IGLSLSSEET KKSNEELYEN VRSDYEKVVR NLIAIFAFHL
ESDTKSRCEM EQDTNVVELN DYEILEIKED LEADYGYSFV VKKCISPAFP AVN