Gene Swoo_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2377 
Symbol 
ID6116648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2916211 
End bp2916540 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content36% 
IMG OID641633883 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001760751 
Protein GI170726725 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0230542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.405359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAA TAACTCTACC TATTCTACTT TTAAGCATGA CGTCACACAT AAGTCTGGCT 
GAAGAGTATG TGGTATCACA AAAAAACAAA TCATTTAGCG AAGATAAGAT ATCAATCAAT
GTAGGAGATA CTGTTCACTT TTTGAATGAA GATCCCTTTT TTCACAACAT TTTTAGCTTA
TCAGATGAGC AGTTCTTCGA TCTTGGCTCC TACCCAAAGG ATGAGAGTCG GTCAGTTGTT
TTTGATACTC CTGGCGTCAT TGAAGTCGAA TGTGCCATCC ATTCAAAAAT GTTTCTATTG
ATTGAGGTAA AGAAAAGTGA AAATAAGTAA
 
Protein sequence
MRRITLPILL LSMTSHISLA EEYVVSQKNK SFSEDKISIN VGDTVHFLNE DPFFHNIFSL 
SDEQFFDLGS YPKDESRSVV FDTPGVIEVE CAIHSKMFLL IEVKKSENK