Gene Swoo_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2371 
Symbol 
ID6116642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2908212 
End bp2909864 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content43% 
IMG OID641633877 
Producthypothetical protein 
Protein accessionYP_001760745 
Protein GI170726719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC AACTAAAAGC GGTCACCTAC AGGATGACCA ACACAAGCCC CTACCCTGAA 
ACGACGTTAG CGAGCTTTAT TACTCGGAGC AAAAATAAAG AGGTAGGTAT CACCTTCTCT
GGTGGAGGCA CGCGCAGTGC TTGTTGCACA TTAGGCCAAC TTAAAGCACT CCATGACTCC
GGTCTAATCA ACAAAGTTAA GTATATCTCA AGCGTATCTG GTGGGGCGTG GGCAGCTATC
CCCTATACCT TTATCAGTGA AATGCAACTT GAGCGATTTT GGGGTGAAAT CTTACCACCT
GAAGATATCA CCTTAGAAAA AATTGAGTCA CCGGCACCTA TGCACAGCCT GCAATACAGT
ATCACTCACT CAGCCGTTGT TGGCCGACTC ATTAAAGCAG GTTTTAAAGG CTATGGTGAT
GAGAGCTTTG CCCATGTATT AAGCCAAGTG TTTTTAAAAC CATTTAAGTT AGATAGCGCA
GATCAGAGCT TTAGTTTTGA TAATGCCTCA GTTGAGAGTG CTTGTGCCAT TAACCCTCAA
ACACTCACAC CTGAAGATTT TGTTACCTCA AGGGAAGACT CCCCTTTTCT CATTGTAGGT
GCGACACTAC AAAGCCCAGA TGGAGTTAAC TTCAATCAAA GTTATCCAGT GGAGTACACA
CCTTTGTACA GCGGCATCAA ACAACACTTT CTTGATGATG ACTGGTTCAG TGCTGATGAT
AACTTTGGCG GCGGTTATAT CGACTCCTAT GGTTATGACT GTATTGGCCC CTATAAGATA
GTGACTCAAG GGGGTAAAAC CATTTTCAGT GTTAAGCGTG CCCCAAAAAA AGGACTCGAC
TTTACCAATG AACGTGCATT TTCATTGGCA GATATTATGG CCAGCACTGG CGCAGCGCCA
CAAGAGGTTA CTGAGTTTCT AGGCTTAAAA TCTTTAGGTT TCCCTGAGTT TAATCATATC
CCGATACACA CAGCAGAAGG AACCGAGCGT TTGGGTGAGG AGTATAGTCA CTCAGATGGT
GGGCACAGTG AAAACTTAGG TATCATGCCA TTGCTGGCCC GTGGCGTTAA ACGTATCTTT
GTATTTATCA ATACCAAGAA AGCCTTTATG CCTGATAAGA AGTTGTCTAA ACCCGATAGA
GCTGCAAGTA AGAAAATTGA CAAAACAGAT CTCAATCGCT CAGTTAAAGC CCTGTTTGTT
CCCCTCAGAA ATTGGCACAG ACTGTCTAAG TTTTCCGATA ACTTGGTATT TAAAGGCGGA
GAAGCGCCAC TGTTGGAATT GATCGAGTTA TTGGCAGAGA AAGTAGACAG CAAGGCTAAT
GGCAATCCAG CAAAGCAGGC CCTGTTTGCG ACTCAAAAGT TAACCACGAT AGAAAATCAT
AAGTTCGGGG TTAAAGCTGA TCAAGAAGTT GAGATCACTT GGATTTATAA CCAGCGTTCC
CAAGAATTCG AAAATGCCCT CAAAGATAAG AGATTAAAGG AGCACCTTAA AGAGCAAGAT
CAAGACGATT GGGATCCCCA TGGCCTTGAT AACTTCCCTC ACTATGACAC CTTTATGGAA
AATAGTGGCG TCATAAAACT CACACCATTA CAGACAAACT TGCTTGTGTC TCACTCACAT
TGGGTAGCAA GTAAAGCCAT CGCATCAAAT TAA
 
Protein sequence
MTKQLKAVTY RMTNTSPYPE TTLASFITRS KNKEVGITFS GGGTRSACCT LGQLKALHDS 
GLINKVKYIS SVSGGAWAAI PYTFISEMQL ERFWGEILPP EDITLEKIES PAPMHSLQYS
ITHSAVVGRL IKAGFKGYGD ESFAHVLSQV FLKPFKLDSA DQSFSFDNAS VESACAINPQ
TLTPEDFVTS REDSPFLIVG ATLQSPDGVN FNQSYPVEYT PLYSGIKQHF LDDDWFSADD
NFGGGYIDSY GYDCIGPYKI VTQGGKTIFS VKRAPKKGLD FTNERAFSLA DIMASTGAAP
QEVTEFLGLK SLGFPEFNHI PIHTAEGTER LGEEYSHSDG GHSENLGIMP LLARGVKRIF
VFINTKKAFM PDKKLSKPDR AASKKIDKTD LNRSVKALFV PLRNWHRLSK FSDNLVFKGG
EAPLLELIEL LAEKVDSKAN GNPAKQALFA TQKLTTIENH KFGVKADQEV EITWIYNQRS
QEFENALKDK RLKEHLKEQD QDDWDPHGLD NFPHYDTFME NSGVIKLTPL QTNLLVSHSH
WVASKAIASN