| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2334 |
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| Symbol | |
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| ID | 6116605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2866248 |
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| End bp | 2868224 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633840 |
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| Product | oxidoreductase FAD/NAD(P)-binding subunit |
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| Protein accession | YP_001760708 |
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| Protein GI | 170726682 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0217317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.528208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCA GTGTAATGGG GAAGATAAAG TTCCTGCACA AGTGGTTATC ATTATTGGTT
GGTATTCAGC TTCTCCTCTG GATTGGCACA GGGCTCTACT TCAACCTGAT GGACAGTCAA
AAGGCACGTG GTACGCAATA TTTAGCCAAA TCGGCAGCCG TGATCGCAGG TGGCACAGAG
AAGCCAGCCC AGATAGAGCC TGCAACACTA TTAAACAGCT TTAAGCCTGC TGTATCCTTA
TCGCAAGTGT CGCTTCTTGA TAAACCTTAC TATTTGCTAA CCCATGATAA AGCGCTCTAT
CCCTACTTTA TCAACCACTA TTCATTGGTG GATGCTATAA CGGGAAAACA GGTATTTATT
GATAAAACGA TGGCAAAAGC ATTGGCCGTT AACTCCTATA ACGGCCCCGG CATCATCACC
TCAACCACTC AGGTATCACC TCCGTTTGAT GACAGATTAA AAGAGAAGAA CACCCTCTGG
CGTGTCAATT TTGATGATGA GATAAATACC AGCGTCTATA TCGATGCGGG CTCTGGCCGC
ATAATCGGCC ACAGTAATGA TGATAAGCGT ATCGTCGATA TCGCCTTTAT GCTCCACTTT
ATGGATTACG CTAATGAGGG CAGTTTTAAT AATGTGCAGA TTATTGTATT TGCCATCTTC
ACCCTGTTTT TCGCTTTTAC AGGTTTTATC TGGACCATAG AACTGGGGCT AAATGGGCAA
TATTCGCTAA CCCAGTTACT GCCAAAGTGT TTAATCAAAA AGCAGAACAA CACGATTCAG
GTCATCGACA TTGACGGCCA GCAATTACGC CATGTTTCAA TTCCTGCCCA TGAAAACTTG
CTCGACGGTT TGATACACCA GAATATCGCA CTGCCTTCAA GTTGTGGCGG TGGTGGAAGT
TGTGGACGTT GCCGAGTAAA ACTCAAACCC GAGGCTAAAG TTACCGCTTG TGACAATCAG
CAATTTACTC AAGATGAGCT GGCTTTAGGT TATCGGCTGG CTTGTCAGCA CACAAGTGAT
GAGATTGACA GCTTAAGTCT GCTTTATATC ACACAAGCCG AAAAGCATCA GCTAGAGCTG
ATTAGCAGTG AGTTTATCAG CCCTTTTATC AAAGAGCTCA GATTTAAAAC CGTTTCAGGT
AAACCTATCA CGTTTAAAGC TGGCGCCTTT ATGCGCTTCT TTATTCCTGC AGCTAGCAGT
CACAGCTTAC CAGTAGCGCT ACCAGAGTCT TTGAGCGCAC ATTGGAAAGA GATAGAGAGT
CATCAATTTA CCCATGACTC CTGCAGTCGT AACTATTCAC TGGCAAACAG CGATAACGCT
TTGCCTAACG CTGAAAAAGA GCTGCATTTC ACCATTAAAC TACAGCAGGC ACCAAAATTT
GCGACCTCAC AGGTTATTAA TCCAGGTGTT GGCTCCCACT ACATCTGTAA TTTACAGCCT
GGAGACAGGG TTGAAGCCGC AGGACCATTT GAGGAGTTCT CGGCTCAGCC AATAAGCGAA
AGAAGCATGG TGATGATAGG TGCAGGCTCT GGTATGGCGC CATTAAAATC ATTAATTGAG
GAGCAGATTG TTAAGCTTAA AAGTACCCGC CCTATTCATC TCTTCTTTGG CGCGCGTAAT
GAAGCAGATC TTATCTATCA GCAGAGGTTC ACGGCACTGG CCCTTGAGCA TACACACTTT
TTCTATTACC CAGTATTATC AAGACCCACT CGTTTATTCA ATGGCAGTGA ACCTGCCAGC
AGCAGTATTA CAAACCATGA TGGTGCTGAC CAATCAAGAG ATAATTCGGC ACCTACACAA
GGCTATGTTC AAGACAGATT AGCGGCTCAA TTAGATGAGA TATCCAAACA AGCTGATGGA
CTGGCTAATG TTGAGTTTTA CCTCTGCGGC CCAGCATCAA TGATGACAAC CACTATTGAA
CAACTCAAAG CCCGTGGGGT AAAAGAGAGC GCGATCGCAT TTGACTCATT TGTTTAA
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| Protein sequence | MNSSVMGKIK FLHKWLSLLV GIQLLLWIGT GLYFNLMDSQ KARGTQYLAK SAAVIAGGTE
KPAQIEPATL LNSFKPAVSL SQVSLLDKPY YLLTHDKALY PYFINHYSLV DAITGKQVFI
DKTMAKALAV NSYNGPGIIT STTQVSPPFD DRLKEKNTLW RVNFDDEINT SVYIDAGSGR
IIGHSNDDKR IVDIAFMLHF MDYANEGSFN NVQIIVFAIF TLFFAFTGFI WTIELGLNGQ
YSLTQLLPKC LIKKQNNTIQ VIDIDGQQLR HVSIPAHENL LDGLIHQNIA LPSSCGGGGS
CGRCRVKLKP EAKVTACDNQ QFTQDELALG YRLACQHTSD EIDSLSLLYI TQAEKHQLEL
ISSEFISPFI KELRFKTVSG KPITFKAGAF MRFFIPAASS HSLPVALPES LSAHWKEIES
HQFTHDSCSR NYSLANSDNA LPNAEKELHF TIKLQQAPKF ATSQVINPGV GSHYICNLQP
GDRVEAAGPF EEFSAQPISE RSMVMIGAGS GMAPLKSLIE EQIVKLKSTR PIHLFFGARN
EADLIYQQRF TALALEHTHF FYYPVLSRPT RLFNGSEPAS SSITNHDGAD QSRDNSAPTQ
GYVQDRLAAQ LDEISKQADG LANVEFYLCG PASMMTTTIE QLKARGVKES AIAFDSFV
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