Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2239 |
Symbol | |
ID | 6116509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2746863 |
End bp | 2747327 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633746 |
Product | hypothetical protein |
Protein accession | YP_001760615 |
Protein GI | 170726589 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.638475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00152162 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGATTAA AATGGACCAT AAAAAGAGAT CGTGAGGTGG TTTACACAGG AACGCTTAAG TCGATGCAGC TCTTTACTGG TATGGCGAGC CTTAAAGAGA CTAATGGGGG GCTTTACGGT GAAGGTGAAT GTATTAACGG CGTTAAAGTC GGCCCATGGT GCCACTATTA TAAAAATGGT CAGAAAATGT CTCAAATGAG ATTTGATGCT GATGGCTTAA CCCATGGCGA GTCACTGCTT TATCATGATA ACGGTGTGCT GTGGAGTAGA AAGATGTTTG ACCACGGCAA ATTAATAGAG CTAAGTCAGA GCTTTTATGA TTCAGGTGCG TTGGAGTCTG AGACACATTA TGATCAAAAG GGTAGGGCTA AATCAATTAA AGAGTATTTT CCTAGTGGGG AGTTAAGACA CACCATGGAG TTTGAGCTAG GAAAACTAAA ACACGAACAG TATTACACGC TGTAA
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Protein sequence | MRLKWTIKRD REVVYTGTLK SMQLFTGMAS LKETNGGLYG EGECINGVKV GPWCHYYKNG QKMSQMRFDA DGLTHGESLL YHDNGVLWSR KMFDHGKLIE LSQSFYDSGA LESETHYDQK GRAKSIKEYF PSGELRHTME FELGKLKHEQ YYTL
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