Gene Swoo_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2239 
Symbol 
ID6116509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2746863 
End bp2747327 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID641633746 
Producthypothetical protein 
Protein accessionYP_001760615 
Protein GI170726589 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.638475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00152162 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGATTAA AATGGACCAT AAAAAGAGAT CGTGAGGTGG TTTACACAGG AACGCTTAAG 
TCGATGCAGC TCTTTACTGG TATGGCGAGC CTTAAAGAGA CTAATGGGGG GCTTTACGGT
GAAGGTGAAT GTATTAACGG CGTTAAAGTC GGCCCATGGT GCCACTATTA TAAAAATGGT
CAGAAAATGT CTCAAATGAG ATTTGATGCT GATGGCTTAA CCCATGGCGA GTCACTGCTT
TATCATGATA ACGGTGTGCT GTGGAGTAGA AAGATGTTTG ACCACGGCAA ATTAATAGAG
CTAAGTCAGA GCTTTTATGA TTCAGGTGCG TTGGAGTCTG AGACACATTA TGATCAAAAG
GGTAGGGCTA AATCAATTAA AGAGTATTTT CCTAGTGGGG AGTTAAGACA CACCATGGAG
TTTGAGCTAG GAAAACTAAA ACACGAACAG TATTACACGC TGTAA
 
Protein sequence
MRLKWTIKRD REVVYTGTLK SMQLFTGMAS LKETNGGLYG EGECINGVKV GPWCHYYKNG 
QKMSQMRFDA DGLTHGESLL YHDNGVLWSR KMFDHGKLIE LSQSFYDSGA LESETHYDQK
GRAKSIKEYF PSGELRHTME FELGKLKHEQ YYTL