| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2209 |
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| Symbol | |
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| ID | 6116479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2708816 |
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| End bp | 2711542 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633717 |
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| Product | outer membrane insertion C-terminal signal |
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| Protein accession | YP_001760586 |
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| Protein GI | 170726560 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.368358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00248616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCAAT TTAAACCTAG CCTACTGACT TTAGCCTTAA TGGCCGCAGG TGCAAGTACG
CAAACCTACG CAGCAGAACC ACTTTCGCAA ACAGACCAAA ATGCAGAAGA AGCGATCGAA
GTGATTGAAG TGACGGGGAT CAGACGCAGC CTCAAAGAGT CACAATCACT AAAGATGTCA
TCCTCATCCA TTGTTGAAGC GATATCTGCT GAAGATATAG GCAAGCTGCC AGATGTCAGT
ATTGCTGAAT CATTAGCTAG ACTTCCAGGC GTTGCCGCCC AGCGACTCGA TGGCCGTGCC
AATGTGATCT CAATTCGTGG ACTGGGACCA GACTTCACAA CCGCAACCTT GAACGGACGT
GAACAGGCCT CTGTTAATGA CAATCGTGGT GTAGAGTTCG ATCAATACCC TTCAGAGCTA
TTAAATCGCG TGGTGGTGTA TAAGACACCC GATGCCTCTG TTATGGCTCA GGCCATTGGT
GGCACAGTTG ATATGCAAAC CATCAGTCCA CTAATTCATG GTGAGCAGAC TATCGCCGTG
TCTCTGCGCG GTGAGTGGAA CGACCTTGGC GCACTTAACA GTGACTCCAC CGACAAAGGC
TACCGCGGTA GTATCTCCTA TGTGGATCAA TTTGCCGATG ACACCTTTGG GATCGCCTTA
GGTTATGCAC GCATGCAATC ACCTAATCAG GAGGAGCGCT GGCAAGCTTG GGGTTACCCA
GAGCTTGACT ATAACCCAGA CAATCCAAAA GTATTGGGTG GGGCAAAACC TTTTGTGCGT
TCAAGTGAGC TTGAGCGTGA TGGTGTTTTA GCCGTATTTG AATACCAGCC AAATGAGACT
TTTCACTCTG TACTCGACAT CTACTACACA AAATTCAATG ATGAGCAGCG CCTTCGTGGC
ATTGAGATCC CAGGCCAATG GGGTGCTGGA TGGGGAAATG CTGGCATAAC AGCCATAGAA
AATAGCGATG GACTCGTGAC AAATGGCACC ATTAATGATG CCGCTGTAAT TGTTCGAAAC
GATATTAATA TTCGAGATGC CGACTCGTTA TCCATTGGCT GGAACAATCA GTTTATGCTC
AATGAAAACT GGAGTGTCAC AGCCGATGTC TCTATGTCCC GTGCAAACAG AACAGACATT
GGCATGGAGA GCTACAGTGG AACAGGCCGT GGAAATGGTA ATGGGGTCAC CGACACCTTA
GGCTTTGCTT ATAATGGCGA AGGAAGTTAT AACTTTGCCC ACAATTTGGA TTACTCCAAC
CCTGATCTTA TCAAACTAGG CGGACCATTT AGCTGGGGAA ACCCTATCGG TCCTGATAGC
CAAGATGGCT TTATTAACAA ACCAGAGATT GAGGATGAAC TAAAATCCCT GCGATTAAGC
GCGGAGTATA TCTTCGATGA TGGCTTTATC AGCAGTATTG AATTTGGCGT TAACCGCACC
GATCGTGATA AGAGTAAGCG GGACAACGGC TTCTACCTAA CCTTAAAGCA GTACCCAGAT
ATGGTACGCG TACCTGATCA GTATCTGCTT TCACCCACCT CTCTCGAGTT TTTCGGCATG
GGTGACATGC TAAGTTATGA CTCGCTGGCT TTCTATAACG ACGGCAACTA CATAGAAACC
AATGCTGACA CAGTTGATCT CAGCCGTGCA ACCAACTCTT GGGATGTCTC AGAGGAGGTC
ACAACCCTTT TTGTGATGGC GAATCTTGAG ACAGAGCTGT TTGGTCTACC AGTTGTCGGT
AATCTTGGTT TGCAATCGGT GCATACTGAT CAAAGTTCAG AGGGAACAGT CGCCACAGTG
GACAGTGGTG AGGTGGTGAA AACACCAAAT TCTGCCGGTG ATACCTATAC CGAATGGCTA
CCTAGTATGA ACTTAAGTTT CGAAGTGGCG GAAGATCAGG TTCTTCGTGT TGCAGCAGCC
AGAACCTTAA CCCGTGCACG TATGGACAAG ATGAATGCTA ACGTCAACTT TAGCTATAAT
GCGTCACCAA CTGATGGCGT CAACTGGACT GGTGGCGCAG GTAACCCTTA CCTCAAACCT
TGGTTGGCAC GCCAGTATGA TATTAGCTAT GAGAACTATT TCAGCGATCA AGGCTACTTT
GCCTTAGCTG TGTTCTACAA AGATCTAGAA AACTTTGTTT ATGATCAGCA CTCAAACTTT
AATTTTGGTG AGATATTCCC AGATCAACCA GGCAACCCTA TCGGTAACGT GACTCAACCT
CAAAACGGCG AAGGTGGATA CGTGCAAGGG ATTGAGGCAT CGCTCTCTAT CGACTTTGGA
ATGTTTGCCA ATGCGCTTGA AGGTTTTGGT ACTATCTTAA GCGGCAGCTA TACCGACAGC
GAAGTGAAGG AAACACCAGA CAGTGAACCA ACCACCCTAC CGGGTTTATC TGAGAAAACC
TTTAATGCGA CGGTTTATTA TGAAACTCGT GGTTTTGAAG CACGCATCAG CTCTCGCTAC
CGCTCAGACT TCCTTGGAGA GGTTACAAAG ATCAGTTTGC AACGTGAAAA CGTGAATATT
AAGGCTGAAA CTGTCGTAGA TGCTCAAATT GGCTATGACT TCTCTGAAAG TGGCATCGAT
GCGCTTTATG GACTGTCGGT TCAATTGCAG GTGAATAACT TAACCAATGA GCCTTTCACC
TCCTATTTTG GTGATGACAA ACGTGAGGTG CGTGATTTCC AGAACTATGG TCGTAACTAC
ATGTTAGGCC TTAATTACAA GTTCTAA
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| Protein sequence | MIQFKPSLLT LALMAAGAST QTYAAEPLSQ TDQNAEEAIE VIEVTGIRRS LKESQSLKMS
SSSIVEAISA EDIGKLPDVS IAESLARLPG VAAQRLDGRA NVISIRGLGP DFTTATLNGR
EQASVNDNRG VEFDQYPSEL LNRVVVYKTP DASVMAQAIG GTVDMQTISP LIHGEQTIAV
SLRGEWNDLG ALNSDSTDKG YRGSISYVDQ FADDTFGIAL GYARMQSPNQ EERWQAWGYP
ELDYNPDNPK VLGGAKPFVR SSELERDGVL AVFEYQPNET FHSVLDIYYT KFNDEQRLRG
IEIPGQWGAG WGNAGITAIE NSDGLVTNGT INDAAVIVRN DINIRDADSL SIGWNNQFML
NENWSVTADV SMSRANRTDI GMESYSGTGR GNGNGVTDTL GFAYNGEGSY NFAHNLDYSN
PDLIKLGGPF SWGNPIGPDS QDGFINKPEI EDELKSLRLS AEYIFDDGFI SSIEFGVNRT
DRDKSKRDNG FYLTLKQYPD MVRVPDQYLL SPTSLEFFGM GDMLSYDSLA FYNDGNYIET
NADTVDLSRA TNSWDVSEEV TTLFVMANLE TELFGLPVVG NLGLQSVHTD QSSEGTVATV
DSGEVVKTPN SAGDTYTEWL PSMNLSFEVA EDQVLRVAAA RTLTRARMDK MNANVNFSYN
ASPTDGVNWT GGAGNPYLKP WLARQYDISY ENYFSDQGYF ALAVFYKDLE NFVYDQHSNF
NFGEIFPDQP GNPIGNVTQP QNGEGGYVQG IEASLSIDFG MFANALEGFG TILSGSYTDS
EVKETPDSEP TTLPGLSEKT FNATVYYETR GFEARISSRY RSDFLGEVTK ISLQRENVNI
KAETVVDAQI GYDFSESGID ALYGLSVQLQ VNNLTNEPFT SYFGDDKREV RDFQNYGRNY
MLGLNYKF
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