| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2196 |
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| Symbol | |
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| ID | 6116466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2689573 |
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| End bp | 2690595 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633704 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001760573 |
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| Protein GI | 170726547 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0908748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000488625 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATCTA AAGCAACATC GATAGATATC GCCTATCGTG CTGGCGTTTC TCAATCTACG
GTATCCAGAG CATTAAGAAA TAGCCCTTTA GTCAATCTAG AGACACGACA GAAGATCCAT
GAGATAGCCA AAGAGCTCAA CTACAAGGTG GATAAAAACG CCAGTAACTT GAGAACGCAA
AACAGTCTGA CTCTAGCCCT GCTTTTATGT GAAGACCCAA CCAATGATGA TTCACTGATT
AATCCTTTTT TTCTCTCCAT GTTGGGATCG ATTACCCGTG CAACAGCCCA GCAAGGTTAT
GATCTATTAG TCTCTTTTCA ACAGTTAAGC AGTGATTGGC ATGGGGATTA CGAGGACAGT
AATAAGGCCG ATGGTATCAT TTTATTAGGT TATGGGGATT ACCTTGATTA CGAAAGTAAA
CTAGATAAAC TGCTGTCGCA AAATACTCAC TTTGTGATTT GGGGGGCTGA GCATAACAAT
AATGCCGTGT TATCTATCGG CTGTGATAAT GTCCAAGGCG GCATGATAGC CACGGAGCAC
CTAATAGAGC AGGGGAGAAA ACAGTTTGCT TTTTTAGGCG GAGCATCGAG CCACAGTCCT
GAGTTTCGCG ATCGTTATTT AGGCCATACT AAAGCAATTA AGCAAGCAGG ACTATCTCAC
AGTAAGAAAC GGCAATTTAG TGCGATCAGT ACCGAAGAGT CGGGCTTTGA TGCGACCAAA
GAGCTGCTCG CTTCAGGACA AAGCTTCGAT GCTATCTTTG CTGCGAGCGA TCTTATCGCT
ATCGGAGCGA TTCGCGCCCT GAATGAGCAG GGTTTACAGG TGCCTGAGGA TGTTGCTGTC
GTGGGTTATG ATGATATTCC GGTGGCGAGT TTTGCCAATC CACCTCTGAC AACAGTTAAG
CAAAATACCC AATTAGCGGG TGAGATTTTG GTTGAGAGTC TGCTTAAGCT AATTAAGGGG
GAGGAGGTTA GTGGACAGTT GATCCCAACA TCTCTGGTTA TCAGAGGCTC CTCATCCATC
TAA
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| Protein sequence | MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQKIH EIAKELNYKV DKNASNLRTQ
NSLTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY DLLVSFQQLS SDWHGDYEDS
NKADGIILLG YGDYLDYESK LDKLLSQNTH FVIWGAEHNN NAVLSIGCDN VQGGMIATEH
LIEQGRKQFA FLGGASSHSP EFRDRYLGHT KAIKQAGLSH SKKRQFSAIS TEESGFDATK
ELLASGQSFD AIFAASDLIA IGAIRALNEQ GLQVPEDVAV VGYDDIPVAS FANPPLTTVK
QNTQLAGEIL VESLLKLIKG EEVSGQLIPT SLVIRGSSSI
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