Gene Swoo_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2103 
Symbol 
ID6116366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2578644 
End bp2579810 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content48% 
IMG OID641633606 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001760482 
Protein GI170726456 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0158602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.562089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAC ACGCAAATTG GAATTTCCCC ACGAATATTA CTGTGGGTGA GGGCTGTTTA 
AGTCAGCTCG GGGAGCAGTG CAAAGCACTT AAGATGACTA AGGTCTTGTT GATCACCGAT
CCGGGCTTAG CTGATCTGCC TATGGTCAAA GAAGCCATGG GCTACTGCAC TCAGGCTGGC
TTAATGGTTG AGCTGTTTAG TGATATTCAA GGAAACCCCA CTGGGGACAA TGTCCGTGCA
GGCGCAATAT GTTTAAAGTC TGGTGGCTTT AATGGGGTGG TTGCTTTCGG TGGTGGCTCA
AGTTTAGATG CGGCTAAAGC GATCGCCATG ATAGCAAAAC AGTCACTCTC CTTATGGAGC
ACTGAAGATG TTGGTGATAA CTGGACCCGT ATCGATGAAA GGCTGATGGT GCCCGTTGTG
GCGGTGCCGA CAACTGCTGG CACAGGCTCA GAGGTTGGGC GAGCGTCAGT GATAACCGAT
ACCGACGGGG CTCACCATGT TAAAAGGATA ATATTTCACC CTAAAATGCT TCCTGCCACT
GTTTTACTCG ACCCAAAGCT CACTTTGGGT TTGCCTCCTC CTATTACTGC AGCGACAGGT
TTAGATGCCC TGTCTCATAG TCTAGAGGCC TATTGTGCGC CGTCTTATCA CCCTATGGCT
GAGGGTATTG CTATTGAGGG TATACGATTG GTGAAAGATT ACCTCCCAAG AGCTGTGGCC
AATGGAGAGG ATATTGAGGC GCGAACTCAG ATGCTGGTGG CATCGAGTAT GGGAGCTACC
AGTTTTCAGC GAGGTTTAGG TGCGATGCAC GCCATTGCAC ACAGTCTTGG CGCCTTGTAT
GACAAGCATC ATGGATTGCT AAATGCGATT TTGATGCCTT ATGTGCTTAA GCGAAATCGG
GCCCAAATAG AGAAAAAGAT CATCCGTTTA TCTCAATACC TCGAGCTTGA TAACCCCAAT
TCTGATGGTT TTATGGATTG GATTTTAGCA TTAAGAGCTG AGTTGAATAT TCCCCATACG
CTCGCTGATA TTGGGATAAC TTTAGCGGAT GTGGTGTTAG TGGGAAAGAT GGCAGCAAAA
GATGCCGCAG CTGGCGGTAA CCCTATAACA TTAACCGATG CGGAATATTC GTTACTCTTT
AGTGACGCGG TAAAAGGAGC GCTTTAG
 
Protein sequence
MDLHANWNFP TNITVGEGCL SQLGEQCKAL KMTKVLLITD PGLADLPMVK EAMGYCTQAG 
LMVELFSDIQ GNPTGDNVRA GAICLKSGGF NGVVAFGGGS SLDAAKAIAM IAKQSLSLWS
TEDVGDNWTR IDERLMVPVV AVPTTAGTGS EVGRASVITD TDGAHHVKRI IFHPKMLPAT
VLLDPKLTLG LPPPITAATG LDALSHSLEA YCAPSYHPMA EGIAIEGIRL VKDYLPRAVA
NGEDIEARTQ MLVASSMGAT SFQRGLGAMH AIAHSLGALY DKHHGLLNAI LMPYVLKRNR
AQIEKKIIRL SQYLELDNPN SDGFMDWILA LRAELNIPHT LADIGITLAD VVLVGKMAAK
DAAAGGNPIT LTDAEYSLLF SDAVKGAL