Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2085 |
Symbol | |
ID | 6116348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2556021 |
End bp | 2557178 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633588 |
Product | galactokinase |
Protein accession | YP_001760464 |
Protein GI | 170726438 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0153] Galactokinase |
TIGRFAM ID | [TIGR00131] galactokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.351225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATT TAATCAATAA AGTAAGCACT GTTTTTGAAG TGGGCTTTCA TTACCAAGCC CAATACGTGC TCCAAGCTCC CGGGCGCGTA AACTTAATTG GGGAACACAC AGATTACAAC GACGGTTATG TTTTACCTTG TGCGATTAAT TACTGTGCGG TTGTTTGTGC CAGTCCTCGT GAGGATAACT TAGTACGAGT TATCTCGGTT GACTACGATG GAGCGACAGA TGAGTTCTCA CTTGATGAGG ACATTATTCC TACCAAAAAT AGTTGGGCTA ACTACATTCG CGGTGTGATT AAGCACTTGA AGTTGAGAGG CTATCAGTTT GGCGGCGCCG ATATTGCTAT CGGTGGAGAT GTGCCTCAAG GTGCAGGTTT AAGCTCCTCT GCCGCACTGG AGGTGGCAAT TGGTCAAACC TTTAAGGCTT TGTATCGTTT AGATATCAGC CAACAAGAGA TAGCGTTAAA CGGTCAAGAA GCTGAAAACC AATTTGTGGG GTGTAACTGT GGAATTATGG ATCAACTGAT TTCTGCTGAA GCTAAAAAAG ATCATGCCTT GCTGATAGAT TGCCGAAATT TAGCAACAAC GCCAGTGGCA CTACCTAAAG GCAACAGTAT TGTTATCGTT AACTCCAACA AAAAACGTGG CTTAGTTGAC AGTGAATATA ATACTCGCCG TAAGCAATGT GAAACTGCAG CGAGATTTTT TGGGGTGAAG GCACTGCGTG ATGTTGATAT AGACACATTT AATGCCCGAG AGCCTGAGCT TGATACTTTG ATAGCAAAAC GTGCAAAACA TATTATCACT GAAAATGCTC GAACCTATGC TGCCGCTAAA GCGATGGCCA GTAACGATAT GCAGACACTG CAGCGGTTAA TGGCTGAATC TCATGCATCG ATGCGAGATG ACTTTGAAAT TACCGTACCT GAAGTGGATG CATTAGTCGC CATTATCAAG TCTGAAGTTG GCGTGCTCGG CGGTGTACGT ATGACAGGTG GTGGTTTTGG TGGTTGTGTA GTTTCTATTG TCCCCGATGC ATTAGTTAAC CAGGTTATCA ATGCTGTAGA GGCGCAATAT TATGAGCAAA GTGGCTTATG GGCTTCCATC TATGTTTGTA CCGCACAAAT TGGCGCTGGC TCAGTTTTTA CAAGTTAG
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Protein sequence | MSDLINKVST VFEVGFHYQA QYVLQAPGRV NLIGEHTDYN DGYVLPCAIN YCAVVCASPR EDNLVRVISV DYDGATDEFS LDEDIIPTKN SWANYIRGVI KHLKLRGYQF GGADIAIGGD VPQGAGLSSS AALEVAIGQT FKALYRLDIS QQEIALNGQE AENQFVGCNC GIMDQLISAE AKKDHALLID CRNLATTPVA LPKGNSIVIV NSNKKRGLVD SEYNTRRKQC ETAARFFGVK ALRDVDIDTF NAREPELDTL IAKRAKHIIT ENARTYAAAK AMASNDMQTL QRLMAESHAS MRDDFEITVP EVDALVAIIK SEVGVLGGVR MTGGGFGGCV VSIVPDALVN QVINAVEAQY YEQSGLWASI YVCTAQIGAG SVFTS
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