| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2026 |
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| Symbol | |
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| ID | 6116289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2488555 |
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| End bp | 2491011 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633529 |
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| Product | ABC transporter related |
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| Protein accession | YP_001760405 |
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| Protein GI | 170726379 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTA CCGCAATTAC GATGCAAGGG GTAAATACCC ATAACCTCAA AGATATCGAT
ATCTCAATTC CTAAGAATAA AATGGTCGTG GTAACGGGGG TTTCTGGTTC TGGAAAATCC
TCATTAATAA TAGATACCTT ATTTGAATAC TCTAAGTCAC TATATATTGG TGCTCTTTCC
AGTAAGAGCT TTGATATGGG GGAGGGAAGC TATCAAGTAG AGAGAGTGAG TGGAACACAA
CCTCCTGTAG CGTTGAAACA ATCGGTAAAG AGACTTGCAA ATCCTCGCTC TACAATAGGA
ACTGTGACAG GTATAGATGG CTTGATTCGA TTGTTGTTTG CTCATGCTGG TAAGCCCTCG
TGTCCTGCTT GTTTTCAAGA ACTAAACAGT GAGCTATTTT GTGATGACTG CGGGCTGTAT
GGAGAGACAT TATCTGCAAA ACAATTTAGC CCAAATAGAA AAGAGGGAAA GTGTTTACAG
TGTAATGGGT TAGGTAAATT AGCTTCTTTT AGTGTTGATC TTATCATTCC TGATAAAACG
AAATCACTCA ACTGGATTTG GGATAATGCA GAGCCCAACA CGTTTAGTCT CCCTAATTTA
CGTAAAGCCT TTGAAGCCAT GTGTGCGGAT GAAGGGATAG ATATCGATTG CCCTTACTCT
AGTTTGAGTG ATGAGGCTAA ACAAAGAGCT TTATACGGTA CTGATAAGGG GTACACAATA
AAAGTTGGAA AGGTAACTAA TGATATTGTA TTTACTGGGA TTATTGGTTA TCAAGAATAC
TCTTATAAAA AAACAACGTC GGTAACACGG CAAAAAGCTT TTGAACGATA TATTGGTGAG
CAGCATTGCC CTGGTTGTGA CGGTGCGAGG TTAAGGCCTG AGTCACTTGC GGTGAAAGTT
GTGGGCAAGA ACTTCAATGA CTGCCAATGT ATGGCCATCG GTGATATGAC CTATTGGCTA
TCTAGTATGA TTCAAGATGG TACTTTACCA GTTGGGGTGC ATGAACTGGC GAATGCCATT
ATCAATCAAG GCCATAATAT CGTAAATGTG GGGCTTGGGT ATCTGTGCTT AAATCGTGAG
TCAGCTTCTC TTTCTGGAGG AGAGTTGCAA CGAATTTTAC TGGCTCAACA TGTTGCGAGT
GATTTAAGTG GGGTTATGTA CGTACTTGAT GAACCAACCA TTGGATTGCA TGAGGAGGAT
ACGCTCAAGT TACTCGACTC TATGCGGCAA CTACGAGACC TTGGTAATTC ATTAGTTGTA
ATTGAACATG ATGAGACGAT TATTCGTGCA GCAGACTGGA TCATTGAAAT TGGTCCAGGA
GCCGGTTCCA AAGGTGGTGA GGTTATATTT CAAGGCTCAT ATGAGGAGTT AATTGACTGC
CAAGCTTCAG CTACAGCCAA GTTTTTTAGA TCTCGAGACA AACTTTCAAG CCATATCCCT
CCGATGAAAG AGTGGTTTAC TATTAACGAT CTTCATCGAA ATAATCTAAA AATAGATACA
GTTTCTTTTC CTGTTAACGC ATTAACTTGT GTCACTGGTG TGTCAGGATC GGGTAAAAGC
TCGCTGGTTA GTTCCATCTA TGATGAAGCG CAAAGATTGA TTGGCGCACG GGCTAAACGA
AAAGAGCTTC AATCTAACCT TCAGGGAGTG GAGGTGTTTA ACGATATTAT CTATGTTGAA
CAAAAGCCTA TTGGGCGATC AAGTAGAAGC ACAATTGCGA CTTACCTAGG TATTAGTGAT
GATATTAGAG ATATGTTTGC TGAATCGAAT GATGCGATAG CTGCAGGCTA TGAGCGCAAA
CACTTTAGTT CCAATGTCGC TGGTGGTCGA TGTGAAGCGT GTAAGGGACA AGGTTACATT
GAACTGGACA TGTCTATCTT TAAAAATGAA GAGGTATTGT GTGAAGAGTG TGACGGTAAA
AAGTTTCAAC CTCAAATATT AGATATCAAA GTTCATAATA AGAATATATA CGATGTTTTG
AATATGACCG TCGATGAACT GGTTCTCCAT TTTAGTGTTG ATGCATACCC ATCTATCCAT
CGAGCCTTAA GTTGTCTTGC TGAGTTCGGT CTAGGTTACC TAGTACTTGG TAGTGCAACA
ACTACTCTTT CTGGTGGTGA AGCTCAACGT TTGAACTTGG CGACAAAGTT GCTAAAAACA
AAATTACAGA GTTCTCTGTT TATCTTTGAT GAACCAACTA GAGGGCTGCA TTTTTCTGAT
ATTCGATATC TCTTAGCACT ATTTGATCGA CTTCTTTCTG ACGGGCATAC CGTTTTATTG
ATTGAGCACA ACCTTGATGT GATATGTCAG TCTCACTGGA TTGTTGATGT GGGGCCAGAA
GGTGGGGATA AAGGGGGAGA AATAGTGTTT GAGGGGGGGA TAGATACCAT GCTTTGTTCT
TCTGATTCAC TTACCGCTAT TCACGTGAAA AGGCATGTTG CTGATTATTA TCAGTAG
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| Protein sequence | MMSTAITMQG VNTHNLKDID ISIPKNKMVV VTGVSGSGKS SLIIDTLFEY SKSLYIGALS
SKSFDMGEGS YQVERVSGTQ PPVALKQSVK RLANPRSTIG TVTGIDGLIR LLFAHAGKPS
CPACFQELNS ELFCDDCGLY GETLSAKQFS PNRKEGKCLQ CNGLGKLASF SVDLIIPDKT
KSLNWIWDNA EPNTFSLPNL RKAFEAMCAD EGIDIDCPYS SLSDEAKQRA LYGTDKGYTI
KVGKVTNDIV FTGIIGYQEY SYKKTTSVTR QKAFERYIGE QHCPGCDGAR LRPESLAVKV
VGKNFNDCQC MAIGDMTYWL SSMIQDGTLP VGVHELANAI INQGHNIVNV GLGYLCLNRE
SASLSGGELQ RILLAQHVAS DLSGVMYVLD EPTIGLHEED TLKLLDSMRQ LRDLGNSLVV
IEHDETIIRA ADWIIEIGPG AGSKGGEVIF QGSYEELIDC QASATAKFFR SRDKLSSHIP
PMKEWFTIND LHRNNLKIDT VSFPVNALTC VTGVSGSGKS SLVSSIYDEA QRLIGARAKR
KELQSNLQGV EVFNDIIYVE QKPIGRSSRS TIATYLGISD DIRDMFAESN DAIAAGYERK
HFSSNVAGGR CEACKGQGYI ELDMSIFKNE EVLCEECDGK KFQPQILDIK VHNKNIYDVL
NMTVDELVLH FSVDAYPSIH RALSCLAEFG LGYLVLGSAT TTLSGGEAQR LNLATKLLKT
KLQSSLFIFD EPTRGLHFSD IRYLLALFDR LLSDGHTVLL IEHNLDVICQ SHWIVDVGPE
GGDKGGEIVF EGGIDTMLCS SDSLTAIHVK RHVADYYQ
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