| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2008 |
|---|
| Symbol | |
|---|
| ID | 6116271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2466816 |
|---|
| End bp | 2467640 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641633511 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001760387 |
|---|
| Protein GI | 170726361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0739573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTA AGGTTTTACA AACACAAAGA AAAGCGTCCA TACAAGAAGC GCTAAAATAT
ATCGTTAAAC TTGTAGCTCA AGCCTGTCAA GAGCCTCAAG ACTTTATCGT GCTACCTGAA
CATGCATTGA TTCAGCCAGA ATGCGGGTTG GATGAAGATA CCGCTATAAA AATACAGGAA
ACCTTCTCCT CATTAGCACT CAAATACAAC ACCTATATTT TGACGGGATC ATGGCTTGAG
GTACAGGGCA GCCATACCGT CAATATTACC CGCCTTCTTG ATAGAAAAGG CCACTGTCTA
GCAAGTGTAA AGCATGCCTT TGATATGAAA GAAAACACAG AAGAGCGTTA CCCAGTCATT
GAGACTGATA TGGGAAAAGT CGGCATATTA CTAGGAAGTG ATTTTTGGAA TATAGAATCC
TCTCGAATTC AAACTCTGCA GGGAGCCGAG TTAGTCTTAG TTTCGGGAAG TTTAACCACT
AAAAACTTAA ACTCCAAACA GTGCTCTATT TGGGGGATAG CAACATTAAA TTGTATTGCC
ATTGCATATG CATCAACCGG TACATCTGTT GATACTAAAG ATGAGAGTGC TGGCGGTAGC
ATGATCGCAT TACCAAGTAA CATTCAAGCT AAAGCAGAAT GGAATCCAGA AGTCATACAG
GCAATGTGGG ATGACGGCTT GATGTCAAAA ACTCGTGAAG CCGACTTAAC ATTCAAGAAC
ACTCTCTGGT TTGGCTTATG GGCAAGACGA AAAGAGTTAT ATGCTCCCCT CTCTATGGCT
GAAGATTTAT CACATTCATC ACCAACAAAT GTAGAAGAGT GGTAA
|
|---|
| Protein sequence | MRIKVLQTQR KASIQEALKY IVKLVAQACQ EPQDFIVLPE HALIQPECGL DEDTAIKIQE
TFSSLALKYN TYILTGSWLE VQGSHTVNIT RLLDRKGHCL ASVKHAFDMK ENTEERYPVI
ETDMGKVGIL LGSDFWNIES SRIQTLQGAE LVLVSGSLTT KNLNSKQCSI WGIATLNCIA
IAYASTGTSV DTKDESAGGS MIALPSNIQA KAEWNPEVIQ AMWDDGLMSK TREADLTFKN
TLWFGLWARR KELYAPLSMA EDLSHSSPTN VEEW
|
|---|
| |