| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1966 |
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| Symbol | |
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| ID | 6116229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2423924 |
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| End bp | 2425288 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633469 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001760345 |
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| Protein GI | 170726319 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.138243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.104456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTACAA TTTGGAGTTT AGATCTCAAT GAGTTCAGCG GACCTAAGTA TGTAAGGATT
GTAACGGCTA TTGAACAAGC CATACATTCA GGCGAACTTA CACCAAACAG TAAGTTACCA
CCACAGAGAC AATTAGCAGA TACAATTGGT GTAACAATAG GTACAATTAC TAGAGCTTAT
GCTCTGGCAG AGCAGAGAGG CTATGTAGAA GCGAGAAGAG GTGATGGCAC TTACGTCAAA
GCAAAAGTCC AGAATACGGA AAGTAGCAAA GTTAACTTTG CGACCTGTCA GCCTCCCTTG
ACCAACCAAA CGGCAACACT TAGCGATATA TTGACCGAAA TAGCCAAAGA TCCTATCACC
TTAAATCAAA TTATGGGTTA TCAGGCCGAT CCTCTGACTC ACCAGCAACA AGCTTTTCAT
CATTGGCTAA CCACCCGCGG TATTGAGCAA GATTCAAAAC AGCTCATCTT CTGCCATGGT
GCACAGCAAG GGTTATTTTC AGTACTAAAC GCTCTATTGG GCAAGAGCGA TGTTTTGATG
CATGAAGAAA ATTGCTACCC AGGGATCAGA GTCGCAGCAA ATCAACTCGG TCTCGATGCC
CATTCGATCC CCCTAACCGA TTCAGGCCTA GATCTGATGG CACTGCAAAC TTTAGTTGAG
CAATATAATC CTAAACTGCT CTACCTAACG CTGAATAACC AAAACCCGAC CTGTATTCAG
TACAGCATGA GTCAACGTCA AACCCTGTTA AAAATGGCGA TTGAACATGA CTTCTATATT
CTTGAAGACG ATGTAAATTA TTGTCTTCCT GAGGAGTGGC ATCTCCCATT GTGGCAACAA
GCGCGAGAAC ATTCAGTCCA AGCACAATCA AGAGTTATCT ATTTATCAAG CCTATCAAAA
ACATTCTCTG GTGGACTACG TCAAGGCTTT ATTCTATTGC CTGAAGCACT TATTGCCCCC
GTAAAACTTG CTCTACACAG CCAATGCTGG ATGGTATCAC CACTGAATAT GGAGATTGCA
GCTCGCTTAA TCAATACACA GGCATTAGTG GGTGAAAGAG ACCTGTTAAT TCGCGAGCGA
CAAGCACTGG CTATCTCTAT GTGTGATCGT TTAAACCTAC AACATCGCTG GCGCGGACTA
AATGGCTGGT TAAAGCTCAA CTCACCTTTA AAAGCTCACC ACGTTGTGAC CGCCCTTGCC
GCAAAAGGTA TACTAGTGCG TAATGGCGAT GACTTTGACA ACCATGATAA TCATATCCGG
ATCAGTATCG GTGCAGCCCA AAACCTAACT CAATTTATAG AGAGTTTGCA GGAAATTGAA
ACAACAATAC AAACCCTCAG CCAAAGTGCT TATTCGGTCG TTTAA
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| Protein sequence | MGTIWSLDLN EFSGPKYVRI VTAIEQAIHS GELTPNSKLP PQRQLADTIG VTIGTITRAY
ALAEQRGYVE ARRGDGTYVK AKVQNTESSK VNFATCQPPL TNQTATLSDI LTEIAKDPIT
LNQIMGYQAD PLTHQQQAFH HWLTTRGIEQ DSKQLIFCHG AQQGLFSVLN ALLGKSDVLM
HEENCYPGIR VAANQLGLDA HSIPLTDSGL DLMALQTLVE QYNPKLLYLT LNNQNPTCIQ
YSMSQRQTLL KMAIEHDFYI LEDDVNYCLP EEWHLPLWQQ AREHSVQAQS RVIYLSSLSK
TFSGGLRQGF ILLPEALIAP VKLALHSQCW MVSPLNMEIA ARLINTQALV GERDLLIRER
QALAISMCDR LNLQHRWRGL NGWLKLNSPL KAHHVVTALA AKGILVRNGD DFDNHDNHIR
ISIGAAQNLT QFIESLQEIE TTIQTLSQSA YSVV
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