| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1959 |
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| Symbol | |
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| ID | 6116222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2409171 |
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| End bp | 2410007 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633462 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001760338 |
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| Protein GI | 170726312 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00109223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0228344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAAC TAACACTGCT TATCGATTTC TTATTCACCC ATAAGCTTTT ACTTACCTTA
CTCATTATCG TTTTAATATC AGCGACTAAA CGTCTCATCA TTTACAAGGT TCGTGGTGAT
GTCTCTTTTT TGAGTGATAC TCAGCGTAAA TGGATCTCCA GAACCAAAAA CGGCACGTTT
ACTCTACTGG TCATTTTGCT GTTTATGTTG TGGCAGACAG AGATCAACAA GTTTGCGCTA
TCGGTAACCG CTATCGCTAT CGCCATTGTT GTTGCATCAA AAGAGATTAT TCTCTGTTTT
ACAGGCTCAA TCCAACGTGC AAGCTCTCGC TCTTTTGTCA TTGGTGACTG GATAGAGGTT
GGAAGTTTAT GTGGTGAAGT GATTGAACAT AACTTAATGG CAACGGTCAT TCAGGAGATC
GATCTCCACC ATGGTCAGTA TCACTACACT GGAAAGACAG CCACTTTTCC TAACAGTACG
TTTTTTACCT ACCCAGTCAA AAACCTGAAC TTTATGAAGC GCTATGTTTA CCATAACTTC
ACCATTACTG TGCCTAAGTT CGTTAATCTA TACCCACTAT TTCCCTCTCT GACAGTGCAG
ATAGAGCAAC ATTGCGAAGA TTTTCATGAA GTCGCTAAGC GCTATAACAG CATCATAGAG
AAACATGCGG GCGTCGACTT ACCTGGGTCT GAGCCCCATA TTCATGTCAG TAGTGGAGCC
ACTGGAGAGC AGCATGTCCA TATCATGATC TTCTGCCCAA CAGAGCGTGC ATCTCATCTA
GAGCAGTCGA TACGAGAAGA TTTTATGCTT GCCTATGAGA AAGAGTTTGC CTGTTAA
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| Protein sequence | MEKLTLLIDF LFTHKLLLTL LIIVLISATK RLIIYKVRGD VSFLSDTQRK WISRTKNGTF
TLLVILLFML WQTEINKFAL SVTAIAIAIV VASKEIILCF TGSIQRASSR SFVIGDWIEV
GSLCGEVIEH NLMATVIQEI DLHHGQYHYT GKTATFPNST FFTYPVKNLN FMKRYVYHNF
TITVPKFVNL YPLFPSLTVQ IEQHCEDFHE VAKRYNSIIE KHAGVDLPGS EPHIHVSSGA
TGEQHVHIMI FCPTERASHL EQSIREDFML AYEKEFAC
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