Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1957 |
Symbol | |
ID | 6116220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2406546 |
End bp | 2408453 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633460 |
Product | alkaline phosphatase |
Protein accession | YP_001760336 |
Protein GI | 170726310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0223046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0148411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA CAAGCAGAGC TATATCGGTA AATAGAAGAG TCAACATTAA GCAAAAGGTG ATAGCGAAGT ATCGAAGCGT TATTCAGTCG ATGTTAGTTA GCTCTTTTTT GCTAGCGGGC TGCGGAAGTG ATGGCAAGGA CGGCATCAAT GCACTGATCA ATGTGACTGA GCTTGAGGTG GGAAGTGAGC AGTGTGCACT TGGTGGTCAG ATAATTCAAA CGGGTTTAGA TATTAATGGT AATGGCCTGC TTGAGGGGGA TGAAATTGAT GACGCACAGA CACAACTTAA TTGTAAAGAG AGCACTAAGC CCTTGGCAGC GGAGTTAATT GCTCGGCATA GTTCAGGTGT CTTTGGGCAA AGTGCAGCAG AGATTGTTGA TTATCATAGG GCATCGAGAA GCATATTTGT GGTGAATGCA AACAGTGGCA AAGTTGATCT GCTTAACGCA TCACTTTTGG TTGATGCCAC AGCAGTCAGT ACAGAGAGTG CTTTGGTTTT AAATAATCTG CCAAAACTTG GAGAGCTCGA CGTTGCTGCC GATATCGCCT TGGCAGAACT AGGGGAGGTT AATAGCTTAA GTATCTTTGA TGATCTGTTA GCTGTGGCTA TCGAAAGGGG AGATGGGCAA GGCAATAAGA AGCAAGCTAA TGGGTTTGTT GCCTTTTATC GTTTATCACA GGCAGGTGAC GCTAGTTTTA TTAAAGCCGT TGAGGTCGGT GCATTACCTG ATAATGTCAC TTTTACCCAT GACGGTAATA GCTTGATAGT CGCTAATGAA GGAGAGCCTA ATGGGGCATA CACCTTAGAC CCTGAGGGAA GTATTGCTGT GATTGCGATT GTGCAAGGAG TACCCGCTGA TAGCGCTAGC ATAATAGACT TTAGCGACTT TAATCTTGGG GGAAGCCGAG AAAGTGAATT GAGCGAGCAG ATCAAGATTA ATGGCCCAGG CTCATCGGTA GCTCAGGATT TAGAGCCCGA ATATATCTCT ATTTCAACAG ATAATAATAG CGCTTTTGTG AGTCTGCAGG AAAATAACGC CATTGCTGTG GTTGATTTAA CGGCTTTGAC GATTAGGGAT ATTTTACCTT TGGGCTTGAA AGATTTCGGG TTAGCACGAA ATGGCATTGA TGCTAGTGAC AAAGATGATC TGATCAATAT CCGTGCTTAT GAAGGCGTTT ATGGTCTTTA TCAACCTGAC ACTATTGCAA GCTTTTCTTG GAAAGGGGGG AATTTTATTG TTTCTGCCAA TGAAGGTGAT GCCAGAGATT ATGCTGGCTT TTCTGAAGAG CTAAGAGCGC AAGATTTGCT GTTAGATGCC AACCACCCAC AAGTTGCTGC GATACAAGAT AAGACCCTGC TAGGGCGTCT TAAAGTGACA AATTCGATGG GAGATGAAGA TCAAGATGGT GATTTTGATA AAATAATAGG TTATGGCGGT CGCTCTTTTT CTATCTGGGA TGAAGCGGGA AATATAGTGT TCGATAGTGG TAATGAGTTT GCTCGTATCA CTGCTGCGGT TTTAGGTAGC GATTTCAATA ATCACAATGA AGAGAGTAAA GGAGATAGTC GTAGTGATGA TAAAGGAGCC GAACCTGAAG CATTAGCGTT GGGAGTGATT GGTGATAAAA GGTACGCTTT TATTGGACTT GAACGAACAT CAGGATTTAT GATTTATGAT ATTACCAACC CATTTGATGT TCATTTTATC GACTACGTGG TCAATCGGGA CTTTAGTGTC GAGTTTGAGA TAGATGGAGA TAATATAAGC GGTATGCCTG AGCTTGCTGG CGACTTAGGC CCCGAGGGAA TGAAGTTTGT CTCAGCAGAT AAGAGTCCAA ACGGGCAAGC GCTGTTGATT ATTGGCAACG AGGTCAGCGG GACGACCTCT GTTTATCAGT TCAAATAA
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Protein sequence | MKTTSRAISV NRRVNIKQKV IAKYRSVIQS MLVSSFLLAG CGSDGKDGIN ALINVTELEV GSEQCALGGQ IIQTGLDING NGLLEGDEID DAQTQLNCKE STKPLAAELI ARHSSGVFGQ SAAEIVDYHR ASRSIFVVNA NSGKVDLLNA SLLVDATAVS TESALVLNNL PKLGELDVAA DIALAELGEV NSLSIFDDLL AVAIERGDGQ GNKKQANGFV AFYRLSQAGD ASFIKAVEVG ALPDNVTFTH DGNSLIVANE GEPNGAYTLD PEGSIAVIAI VQGVPADSAS IIDFSDFNLG GSRESELSEQ IKINGPGSSV AQDLEPEYIS ISTDNNSAFV SLQENNAIAV VDLTALTIRD ILPLGLKDFG LARNGIDASD KDDLINIRAY EGVYGLYQPD TIASFSWKGG NFIVSANEGD ARDYAGFSEE LRAQDLLLDA NHPQVAAIQD KTLLGRLKVT NSMGDEDQDG DFDKIIGYGG RSFSIWDEAG NIVFDSGNEF ARITAAVLGS DFNNHNEESK GDSRSDDKGA EPEALALGVI GDKRYAFIGL ERTSGFMIYD ITNPFDVHFI DYVVNRDFSV EFEIDGDNIS GMPELAGDLG PEGMKFVSAD KSPNGQALLI IGNEVSGTTS VYQFK
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