Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1918 |
Symbol | |
ID | 6116181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2364589 |
End bp | 2365368 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633421 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001760297 |
Protein GI | 170726271 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0612288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGT TAATCAATGT GCACGCTTTT AAAAGCTCGC AACCACAAGC ATTAAGAGAC GTTCCCATCT ATATTCCCAG TATTGTTGTG ATACAAGCGG GGGCTAAACT GCTGAGTTGG CAAAGTGATA CGTTAACGTT CGAGAGGGGG ACTTGGTTGT TTGCTCATGC TGAGCAATCG CTTACTTTTA TTAATCACCC TGCTAATTTT ACATTTCGCT CAATTCAAAT TTGTTTCTTA TCGCCTCCTT CCTCAGCGAT TATGGAGTCG ATGGTTGATG AGAGAGGGAG GCGTTTAACC AAATCACCTA AAGTGGTCTC TAATACAAAG CTTGATTTTG CTTTGAAACA GCTACTTGCT ATGCAAGAGC TGGACTTTAC CGAGCAGACT CAGCAACACT ACCTTGATGC CTTTTATCAA ATACTGTTAG AAGCTGGGTT ACTGCAGCTG CTTTTCCCTG GGGCTGATCT TTCAATGCGA GAGAGGGTAT GTCGGTTTTT GAGTAATGAG CCCGCTAAGG CTCATTCCAT TGATGAGCTT TGTACACACT TAGGCCAGAG TCGATCGACG TTAACACGAC GGTTAGCTGA TGAGAGTACC AGTTATCGTG AACTCTTAAG TGAGACTCGT ATGCTCCATG CGCTCAGTTT GATGCAGACC AGACCCTACA AGCAGTTGGA GCTGGCATTG GCCTGCGGTT ATCAGTCTGA AACTCGCTTT GGTCAACGTT TCCTTAAGCA GTTTGGACTC ACTCCTAAGC AGTATATGAA GACGCTTTAA
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Protein sequence | MAKLINVHAF KSSQPQALRD VPIYIPSIVV IQAGAKLLSW QSDTLTFERG TWLFAHAEQS LTFINHPANF TFRSIQICFL SPPSSAIMES MVDERGRRLT KSPKVVSNTK LDFALKQLLA MQELDFTEQT QQHYLDAFYQ ILLEAGLLQL LFPGADLSMR ERVCRFLSNE PAKAHSIDEL CTHLGQSRST LTRRLADEST SYRELLSETR MLHALSLMQT RPYKQLELAL ACGYQSETRF GQRFLKQFGL TPKQYMKTL
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