| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1907 |
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| Symbol | |
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| ID | 6116170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2347765 |
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| End bp | 2349492 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641633410 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001760286 |
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| Protein GI | 170726260 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGT TAGCGCAAGC TGAAAATTCC ATTGTAGAAC AATGTCATAT AAGTATGAAA
CAGGAGAGTG CACAGATAAG CAAAACAGTG TGTGAAGAGA AGCTTGAGCA AGTCGATAGA
ACGCTTAACC CACTCATGAC TGCTAAGCTC ATGCTCGCCC TTTATGATAT CAACCTAGAC
TTAGGTGACA GCCAAACAGC TGAAGAGTAT CTGCAATCAG TTAAGCAAAG CGATGAGTTT
AATAGAAGTG ATGAGATCCA GTACCTATGG CTTCGTAAAA AAGCCACTCA ACATCTATAC
AGAAAAGAGT ATCAAGCAGC GAAAAAATTA TTTGAGCAAG CTTTTACTAT TGCGAAAACG
ACAGCATCAG ATCTATGGTT AGCTAAAAGC TATAATGATC TAGCTATCAT AGAAGAGATG
CTTACCAACT ACTCTAATGC ACTAACATAT TACAAAAAAA GCCTAACGAT TAAGGAGAGA
ATTGGCAATA ACCTATACCT AGCAATTACC CTGAGAAACT TAGGTTTAAT GTACAAAAGC
CTTGAAAAAT TCCAAGAGGC ACAACACTAT TTTGAACTAT CTCTTGAACA TTATATTATT
TATACCAGTG CCAACACAGA TATTTATGCT ATCAACGCCA TGTCTCACCT TTACGGTGAT
CTTGCTGCAA TATACGACAT CACCAGTGAC TATCATAAAC GCTACTTTTA CAGCAATAAA
ATCATCAAAG CATACAGCGA CACATTAAAT CAAATCGATC TCATCTCAAC TCTAGTCTCA
CTTGCAACTA TACATATCAA CGCCAATGAA TTAACACCCG CAAGTGAAGT GATAGAAACG
CTATCACAGT ATCTAGATTC TAACGAGCAC TCCTTCCATG ATGATATCTA CCTATTGAAA
TCTCAGCTTG CCAAACATGA AGTTGATGAT CTTAAGGCTA TTGAATATAT CGAAGAGGCC
ATCAAACACA GTGACTCGAA CCAAAACTCA CTGCAAAAAA TGAAAATCTA CCGCTACGCC
AGTGATCTCT ATTATGACAA TGGCCACCCT TACGAAGCCA TAGTCTATTT AAAGAGATAC
CAAGCACTAC ATGAAACACT CCTCGAAGCC AAATACAGCG AGAACATCAA TATTATTCAA
AGAGAGATTG AAAATGAGCG CATTCAAAGA GCTCTTGTCG AAGAGCAAGT GATTAATCAA
GGTAAAACGC AAAAAATTGA TAAGCTGGTT AATCTATCGT TAATCATCAC CAGTATCAGT
CTGTTTATCG GGTTTATCAT CTCTCTCTAT ATTGTGAAGA AGAGAAAAGC CCAACAACAT
CTTCTGACTG TGATCGAATC CCATAAACAG CAACTATTTT TACTCTCTAA TAATGAAAGT
GAACAAACAG TTTCCCCCTC AAGTCAGCCA TTATCTGAAC TGCTGGTCAG TACCATGATC
GATTGTATCG CCCTTTGGGA GAAAGCGACC CAAACCAACA AGGTAGAACT TGCTGATAGA
AGTAAAATTT GGAAAATATC GGTGGACTCG GGACGGCTCA GAACCCGATC ACTGGACAAA
TACCTCAGCC TAAAGACGCT ACCAGACAAT CCAAGGTGGC GTAACGTGGT AAAAACCTGC
CACTTTGTCT TGTCTGAATG TGAGCTGTCT AGCCATGATA GAGAGCAACT CACGACTCAC
CTCAATCAGA TAATGTTACA GATAAAAAGT GAATCAATGG AGACATAA
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| Protein sequence | MTSLAQAENS IVEQCHISMK QESAQISKTV CEEKLEQVDR TLNPLMTAKL MLALYDINLD
LGDSQTAEEY LQSVKQSDEF NRSDEIQYLW LRKKATQHLY RKEYQAAKKL FEQAFTIAKT
TASDLWLAKS YNDLAIIEEM LTNYSNALTY YKKSLTIKER IGNNLYLAIT LRNLGLMYKS
LEKFQEAQHY FELSLEHYII YTSANTDIYA INAMSHLYGD LAAIYDITSD YHKRYFYSNK
IIKAYSDTLN QIDLISTLVS LATIHINANE LTPASEVIET LSQYLDSNEH SFHDDIYLLK
SQLAKHEVDD LKAIEYIEEA IKHSDSNQNS LQKMKIYRYA SDLYYDNGHP YEAIVYLKRY
QALHETLLEA KYSENINIIQ REIENERIQR ALVEEQVINQ GKTQKIDKLV NLSLIITSIS
LFIGFIISLY IVKKRKAQQH LLTVIESHKQ QLFLLSNNES EQTVSPSSQP LSELLVSTMI
DCIALWEKAT QTNKVELADR SKIWKISVDS GRLRTRSLDK YLSLKTLPDN PRWRNVVKTC
HFVLSECELS SHDREQLTTH LNQIMLQIKS ESMET
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