| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1902 |
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| Symbol | |
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| ID | 6116165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2341871 |
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| End bp | 2343130 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633405 |
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| Product | membrane-fusion protein |
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| Protein accession | YP_001760281 |
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| Protein GI | 170726255 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0558652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGT GTCAATTCTC TTTCACTAAG TCTGTAAATG GTGCATTTAA TTTGAGCCGT
AATTTAATGA AGTCATCAGT GTTAATCGCG ATGTTGGCAT TATCAGGCTG TAGCCAGCAA
GCCAGTGATG GTGTGTTAAC AATGGATGTT CAGCGAGCGG ATTTTACCTT TGATATACCC
GCAGCGGGTG AGCTAGAGGC GAGCAATGCA ACTGCTGTAA CTGTGCCTTC AGGATTAAGA
GGTCCACAAT CTTTAGCTTG GATATTAGCC AACTTTACTC AAGTTGAGGC CGGTGATGTG
GTTGCCAGAA TGGATCCAGA GCGGGAAAAT TATCGACTTA AGATGGAACA GTTTGATTTC
GATAAACTTG CTTTTGATAG TCAGATCCAG ACAGAAAAAG ACAATACGAT TAGTCAAAAC
TTACTGGAAG GCACCCAGAT AACGAGTCAG GAGAAAGATC TTGCTGAGCG TTACTTCAGT
GATGATGAGC GGGTTTATAA CAAGATAGAG ATCATCGATC AGATGCGAAA TCAGGACTAT
CTAGTGGCCA AGATGCACTA TTTTGATTGG GGGTTAGAGC AACATGGCTC GCAAGCTGAA
GCGGAGCAGG AGTTAATAAA GCTTAGACAA AAGGGGCACT CAGCCAAAAT CAGTCGGTAT
GAGAGTAATC TAAATCAGAT GGAGATCATT GCGCCTCATG ATGGCCTGTT TGTTTACCAA
GCGGGTTGGG ATGGCTCTTT TCCCGTCGTG GGTGACATGA TGTGGTCTGG CACCTCCATT
GGCTTGTTGC CTGATACCTC AGTTATGCAA GCAAAATTAT ATGTTCAGGA GTCAGAGGCG
GCGGGATTAG CTGTAGGAAA AAAGGCAACC GTTTATCTTG ATGCCTATCC TGACAAACCT
TTTACTGGTG AAGTCACTCA ACTAGATGCC TTGGCAAAAC CTAAGGATAA AGACAGTCCT
GTTAACTACT TTCAATTTAC CATTAGCCTA GATAGAACCG AGGTGGGCAT TATGCAACCC
GGTAGGCAGG TTCAGGCAAA AGTGCATATG TTGAGTTTAC ATAGCGTGTT GACAGTTCCC
AATCAAGCAC TTTTCCAAAA AGAGGGTCAG TATTGGGTCT ACCTTAAAAC GGCAGAAGGT
TTTGTTAAAC AAACCGTGGA GATGGGCAGC CGAAGTCTAA ACCGCACCGA GATCACTAAG
GGATTGAGTG AGGGGGATGT GATAGCACTG ACTACACCTC CTAAAAGGAG TCGAGTATGA
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| Protein sequence | MSECQFSFTK SVNGAFNLSR NLMKSSVLIA MLALSGCSQQ ASDGVLTMDV QRADFTFDIP
AAGELEASNA TAVTVPSGLR GPQSLAWILA NFTQVEAGDV VARMDPEREN YRLKMEQFDF
DKLAFDSQIQ TEKDNTISQN LLEGTQITSQ EKDLAERYFS DDERVYNKIE IIDQMRNQDY
LVAKMHYFDW GLEQHGSQAE AEQELIKLRQ KGHSAKISRY ESNLNQMEII APHDGLFVYQ
AGWDGSFPVV GDMMWSGTSI GLLPDTSVMQ AKLYVQESEA AGLAVGKKAT VYLDAYPDKP
FTGEVTQLDA LAKPKDKDSP VNYFQFTISL DRTEVGIMQP GRQVQAKVHM LSLHSVLTVP
NQALFQKEGQ YWVYLKTAEG FVKQTVEMGS RSLNRTEITK GLSEGDVIAL TTPPKRSRV
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