| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1901 |
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| Symbol | |
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| ID | 6116164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2340663 |
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| End bp | 2341874 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633404 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001760280 |
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| Protein GI | 170726254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.164629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CTGTTAACTC AATAGCAAGG AAGACATGGA TTAAAAGCTT TGTACTCTCT
TCGCTTACAT TATCCTCAGC CTCTATGTTG TCGGCCTGCA ATCATGAATC TGTGACCAGG
GTAGAGCAAG GTGTCCTAAG TCAAAGTATC GAAGCATCCG GTGAGCTTGT TTCGGCTGAT
ACCGTTTCAT TAATGCCGCC TTCAATTCGC CGTGTGTGGC AGTATCAAGT TAAGCAGTTA
GCTCAAGAGG GAGCAGAGGT TCAGCAGGGT GATATGGTTG CTCAACTCGA CACCTCTGCC
TTGACGCAAA AGCTCTCAGT TAAAACAGCC AAGTTAGAAG CGACTCTTCA AGATATTGAA
ACTTCCAAGT TAAGGAATGC AAAAAAACTT GAGGAGCTGA GACTGGGACT CGCGGAAGAC
AAGATGAACC TTGAGAAAGC GGAGCGTAAA TTTAGGCTGT CAGATGAAAC CGTAGCTGCC
ATTGAAAAGT TTAAATATCA AAAAGATGCA GAAATAGCCC GAGATAAGGT GAACTTAACA
GAGCAGAAGC TGGTTTTAGA AGTGAAAGGG GCTAAACAGA GGGAGGCGAT GTTGATGGGG
GACCGTCAGA AATTTGCTGC TGAAGTTGAG CAACTTAAAC GTGGAATACA ATCCTTAACG
CTTATCGCCC CGCGAAGTGG AATGGTGGTT TATTGCAATG ACTCTCAAGG TAATAAGATA
AAAGAGGGTC AGTCAGTATT TATGGGGGAT GCGGTGCTAA GTATTCCAGA TCTGACCCAT
ATGCAGGTCA ATATGACGAT CCCGGAGGTT GAGGCGAGAC GGGTTAAGAT AGGTCAAGAG
CTTAAGATTA GACTTGATGC GAACCCTGAT AAGGTTTTTA CCGGTAATAT TATTGAACTC
GGCGCTGTAT TTCGCAATAA AAACCAAGAG GTTCCTTTAG TTGTTTTTGA TGCTGTTGCC
AGCATAGATG AAGCGGATAC TGAGTTGATG CGCCCAGGTA TGACCGCCAA AATATCGATT
GATATTGCCA ATGAAAAGCA GGAGTTACTT CTCTCTCTCG ATGCTGTTCA TTACGACGCT
GGACAGGCAT ATGTGTTTAC TCCTGATACT TTTAGTAACA GTAAACAGGC TGTCACTATA
GGTGCGATAG GTAAAGAGCG AGTGTCTATC ACATCAGGAT TAGCATTAGG TCAGGAGGTT
GTACTGCCAT GA
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| Protein sequence | MKKTVNSIAR KTWIKSFVLS SLTLSSASML SACNHESVTR VEQGVLSQSI EASGELVSAD
TVSLMPPSIR RVWQYQVKQL AQEGAEVQQG DMVAQLDTSA LTQKLSVKTA KLEATLQDIE
TSKLRNAKKL EELRLGLAED KMNLEKAERK FRLSDETVAA IEKFKYQKDA EIARDKVNLT
EQKLVLEVKG AKQREAMLMG DRQKFAAEVE QLKRGIQSLT LIAPRSGMVV YCNDSQGNKI
KEGQSVFMGD AVLSIPDLTH MQVNMTIPEV EARRVKIGQE LKIRLDANPD KVFTGNIIEL
GAVFRNKNQE VPLVVFDAVA SIDEADTELM RPGMTAKISI DIANEKQELL LSLDAVHYDA
GQAYVFTPDT FSNSKQAVTI GAIGKERVSI TSGLALGQEV VLP
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