| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1900 |
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| Symbol | |
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| ID | 6116163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2339671 |
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| End bp | 2340666 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633403 |
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| Product | multidrug resistance efflux pump-like protein |
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| Protein accession | YP_001760279 |
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| Protein GI | 170726253 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.178865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTG ATTGCCGTCC TAAGCTAAAC TGCCGTCGTT TATGCTCGCT ACTGTTTTTA
CCATTTTTGT TCATCCATTT TTCAAGCACC GCTGCTAATG AGTCACTGTT ATTAACGGGA
AAAGTCTCAT CGGTAAAGTC ACAGTCATTT ATGGTACCAA AGGCCGGTGA TGCATGGCGT
TATCAGATAC AGTGGATGAT GCCGGAGGGG GAGATTGCTG AGCCTGGACA AGTGGTCGTT
ATTTTCGATA AAACTCAAAT TGATAATCAG ATTGAACAGC TAGAGGCGAG TTTACTGAGG
GTGACAGCGC AGGAGCAGAG CACATCAATC GACTTAAAAG CGAGTGTTTT ACAGGCAAAG
TTCGATCTGA AACAGAAGGA AACAGAGCGT GATAAGAGTC AGCTTGATGC CGATGTGCCT
GCGGACTATA TCGCAGCCAA AGAGTATGCG GAGAATCAAT TTAAGCTGAT GCAGGCCAAT
AGTGAGTTGA TTAAAGCAGA ACAAGCATTA AAAGAGGTGT TAGATAAACA ATCTGCCAGT
AAAGCTCAGC TGGCAATTGA TAGAAGCCGA GCTCAGCTTG AACTGCAACA AGCATTAGAT
GGAATAGAGC AACTCACACT AAAAGCGGAA ATAAAGGGGC CGCTACTTTA CAGTAGCGAA
CCTTGGTCTG ATAAAAAATA TGCGGTGGGG GACACAGTAC AGATTGGCCG TCAGGTTGCA
AGCTTACCAG CAATGGAGGA GTTGGAGGTT GTCGCTTGGG TCAATGAGGT CGATGTCGAT
AAAATTGAGC CTAGCAGCCG GGTCACACTA AGGCTGGATT CTCAATCTAA TATGACCTTC
AGTGGTCAAA TTAAAAGTAT CGGTAGGCAG GCGCAGAAGC AAGCAGCTTG GGGAAACAGT
AACTGGTTTA AAGTGGAGAT AAGTTTTACC CCCGATGAGA AAGTGAAAAT TATTCCGGGT
ATGAGCGTAT TAGTGACCTC GGAGGTGAAG TTATGA
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| Protein sequence | MPLDCRPKLN CRRLCSLLFL PFLFIHFSST AANESLLLTG KVSSVKSQSF MVPKAGDAWR
YQIQWMMPEG EIAEPGQVVV IFDKTQIDNQ IEQLEASLLR VTAQEQSTSI DLKASVLQAK
FDLKQKETER DKSQLDADVP ADYIAAKEYA ENQFKLMQAN SELIKAEQAL KEVLDKQSAS
KAQLAIDRSR AQLELQQALD GIEQLTLKAE IKGPLLYSSE PWSDKKYAVG DTVQIGRQVA
SLPAMEELEV VAWVNEVDVD KIEPSSRVTL RLDSQSNMTF SGQIKSIGRQ AQKQAAWGNS
NWFKVEISFT PDEKVKIIPG MSVLVTSEVK L
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