| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1823 |
|---|
| Symbol | |
|---|
| ID | 6116086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2254164 |
|---|
| End bp | 2254448 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641633326 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_001760202 |
|---|
| Protein GI | 170726176 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00689544 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACC ACTTTAGCGT GCTTGGCATT AAGGCAAGTG CAAATGAAGA TGATATTAAG
AAAGCATACA AACGTTTAGC AAACCGATTC CATCCGGATA AACTACTCGG TGCATCCGAT
GAAGATAAGC AGCAAGCTGA GGTACAACTT CAGCGAGTAA AGCAAGCTTA TGAAGTGCTG
TCTAACCCTA AACTTAAAAG CGCTTTTGTT AAAGACTTCA ATAATGTCAT TGTGACCGAC
CCTGCTGCCG CTATGCGCGA GCTGTGGGAT CAATTTTATT CTTAA
|
|---|
| Protein sequence | MINHFSVLGI KASANEDDIK KAYKRLANRF HPDKLLGASD EDKQQAEVQL QRVKQAYEVL
SNPKLKSAFV KDFNNVIVTD PAAAMRELWD QFYS
|
|---|
| |