Gene Swoo_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1785 
Symbol 
ID6116048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2207732 
End bp2208088 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content42% 
IMG OID641633288 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001760164 
Protein GI170726138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000697437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCAGAT CCCACATCAG ACATGAATTG TCGAAACTAG AAAGTTGTCT CAGGAAGGAG 
ATAGGTGAGC TTGCCAATAA ACACCAAATA AAACTAGAAA GTAAGCAGAG TAGCCTCTGT
GAGATTATCG AGGTCTTAAC TCAAGCAAAG CTATGTGATG AGCCATTATT TTGTAGACTC
ACAAAACTCG ACGCCGCTTT TTGTCAGCTC GATATTGGAC TCTATGGGTT ATGCGCTGAT
TGTGAGAATG AGATTGAACC TGAAAGGCTA GCTTGGGATA TGCTCGAACA AAGATGTGCA
GAATGCGCTG AAAACTATGA GCATCAACAT AGGCAAGAGC TAAGGCTTAA TCATTAG
 
Protein sequence
MSRSHIRHEL SKLESCLRKE IGELANKHQI KLESKQSSLC EIIEVLTQAK LCDEPLFCRL 
TKLDAAFCQL DIGLYGLCAD CENEIEPERL AWDMLEQRCA ECAENYEHQH RQELRLNH