| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1723 |
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| Symbol | |
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| ID | 6115964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2139989 |
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| End bp | 2141815 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633205 |
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| Product | histidine kinase |
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| Protein accession | YP_001760103 |
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| Protein GI | 170726077 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.10547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATAA ACACTAAAAA ATATCTACTT ACAACGTCTC TAATTATCTC AGGGCTGATT
CTGACCCTAT TTTCGACCCA CAGGTACTAT CTCAATGAAG GCTACCAAGA GACAGATCAC
AGCTCTCAGC AGCAGATGAA AGAGTTGATC AACTTCCTTG GCGCATCACT ATCAAGGTAT
GAGAGTATTC CCCATGTACT TTCCACTAAC CCCTTACTCA AAAATGTTCT GCTAAACCAG
CAAGATGAAA AAAATCTACA AGCACTCAAT ATCTATTTAG AACAGATACA AAACATCACG
GAATCATTAG ATATCTATCT AGTCGATGCT CTCGGCGTCG CAATTTCTGC GAGTAACTGG
CGAGAAAACT ACTCTTTTAT TGGTAAAGAC TTCTCCTTCA GACCCTATTT TCAAGAGGCG
ATTGAGGGGA ATTTGGGTCG CTATTTTGCT GTTGGCACCA CTTCAAATAA ACGTGGATAT
TACTTCTCAT ACCCCATCTA TAGTCAAGCC AGTATATTGG GCGCGATTGT GGTAAAGGTC
GATATCACTG ATATCGAAAA GCAAAGCACA GGCATTGCTC GAGCTGGCGG TTATGAGTTC
GCCGTTGCCG ATCCAGATAA CATTATCTTT TTATCCAGTA TCAACGAGTG GCAGTTAACC
TCACTCACTC CCATCGATCA ATCTCGTCAA TATGCTATTA ATGCCTCTAA GCGATATGCT
AACCGCGTGA TTAATGAATT AACCCTTTAC CCACCCTACA AAAATACATC TAACAAAGAA
CATAAAATCT ATCGAATTAA TGCCAACACC AAGCAACATG ACTATTTGGA AACCCATAAA
GCGATGAACA GAGCTGGCTG GACGGTGCAT ATCATGACCC CACTAGCTCC CATATACCAG
TCTTTGCCAG CCATTATGCT GCTTTACGCG ACCCTTTACC TTTTGTTAGC ACTAGCCGCT
CTTTTAGGTT ACGAAAAACG TAAAAACCTG CTAAGAATAC AGCAGGTTAA TGACATGTTA
GAGCAGAGAG TTAAAGACAG AACTCAAGAT TTAGAGGCAA GCAACCGCAT GCTAAGTGAA
ACCCAAGATG AGCTTATTCA AGCGGCAAAG CTGACCGTTA TAGGTAGCCT GTCCGCCAGT
ATTAATCATG AGATAAACCA ACCACTGGCC GCGATTAAAA GCTATGCACA AAATACCCTA
ACACTGTTAT CCAGAAATAA GACTGAGCAT GTAAAGGACA ATATTCATAC CATCATCTCA
CTCACCAACA GACTTGCGAC CATCGTCAGC CAATTTAAAA GCTTCACCCG TAAGAGCCAA
GGTGACGATA GTGCGACGAA TATTGAGCTG TGTATTCAAG ATGCCATGAC TATCATTCAG
CCAGAGATTG ATAAACAAGG TGTGGAGCTA AAGCTGATAA CAAGCACCGA GCACTATGAA
ATATGGGGAG ATGACATTCG GCTTCAACAA GTACTCGTCA ATTTAATGAG TAACGCCATC
CTCGCTATGG AACGCAGTAA AGTAAAACGG ATCACCATAC GTATTGAAAA GGGTGAGATG
CTCTGTATCA AAATTCAGGA CAGCGGTCCC GGTGTGCAAG ATAGCCAGAT GGAAAAGATA
TTTGAGCCAT ATTACACCAC TAGCGATCGA CAAGGGCTAG GCCTGGGCTT ATCCATTTCC
CGTAGAATTA TCGAGTCTAT GCAGGGCAGT ATTGAGGTCT CTAACGCTGT TGACGGAGGA
GCAATATTTG AAATTTGTTT ACCCATTTAC CACAGTGAAA TGAAAAATGA GCCACCTACG
CATCGACACC AAGGAGAGCA TTTATGA
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| Protein sequence | MSINTKKYLL TTSLIISGLI LTLFSTHRYY LNEGYQETDH SSQQQMKELI NFLGASLSRY
ESIPHVLSTN PLLKNVLLNQ QDEKNLQALN IYLEQIQNIT ESLDIYLVDA LGVAISASNW
RENYSFIGKD FSFRPYFQEA IEGNLGRYFA VGTTSNKRGY YFSYPIYSQA SILGAIVVKV
DITDIEKQST GIARAGGYEF AVADPDNIIF LSSINEWQLT SLTPIDQSRQ YAINASKRYA
NRVINELTLY PPYKNTSNKE HKIYRINANT KQHDYLETHK AMNRAGWTVH IMTPLAPIYQ
SLPAIMLLYA TLYLLLALAA LLGYEKRKNL LRIQQVNDML EQRVKDRTQD LEASNRMLSE
TQDELIQAAK LTVIGSLSAS INHEINQPLA AIKSYAQNTL TLLSRNKTEH VKDNIHTIIS
LTNRLATIVS QFKSFTRKSQ GDDSATNIEL CIQDAMTIIQ PEIDKQGVEL KLITSTEHYE
IWGDDIRLQQ VLVNLMSNAI LAMERSKVKR ITIRIEKGEM LCIKIQDSGP GVQDSQMEKI
FEPYYTTSDR QGLGLGLSIS RRIIESMQGS IEVSNAVDGG AIFEICLPIY HSEMKNEPPT
HRHQGEHL
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