| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1710 |
|---|
| Symbol | |
|---|
| ID | 6115951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2127050 |
|---|
| End bp | 2127724 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641633192 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760090 |
|---|
| Protein GI | 170726064 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0344623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.96681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGAGTA AACTGGTGGA AGTACGTTCG AGTGTTAAGC GAAATGCCAT TACGCTCACC
TTTGTTGGGC TGGTTGGGAT TATTTTAGGT TTAGTTCTAT TTCTCAGCTC TTCAGTGCTT
TTTGCTCCCG CTTTATGTGC TTTTGCTTTG GGGATTATCG CAACAGTGCT TGGGGTTTCC
AAACAGATGG AGCCTGAGGT GAGCATCACT TTGTCACCTG ATGGACTCAG TTATCACCAT
AGGCGAGGCA GCTTGTTTAT TGAGTGGGAA AATGTTCAAC GCTTTGATAT CCCTAAAAGT
CTAGATGGTC TTGAGACGAT TGAATTGCCA TTTATCGGGA TCCGTTTGAA AAAAATCAAC
CCAGTACTTG ATGTGATCCC TGGCCGTCTT GCTACAGGCT TACTGACTGA GCAGCGCCCC
TTGCTAATGT CTGCTGTGAC ATTAGATGAG AATTTAGAAG TACTAGAGGA CTACCTTAAC
TCTGAATTTA CACCTTTATT GGTTAATGGT GAAAGGTATA GAGGGGTACT GGCTATGTAT
GGACACAGAA GTGAGATGTT AAACAGAAAT TTAGGCTATC ACCAATATAT CCCTTTTGAT
TGTTTAGACA GAGAACCTAG AGAGTTTTTA ACCCTATTAA GGGATTACCT GCAAGAAGTC
AGAGAGAGCG CTTAA
|
|---|
| Protein sequence | MQSKLVEVRS SVKRNAITLT FVGLVGIILG LVLFLSSSVL FAPALCAFAL GIIATVLGVS
KQMEPEVSIT LSPDGLSYHH RRGSLFIEWE NVQRFDIPKS LDGLETIELP FIGIRLKKIN
PVLDVIPGRL ATGLLTEQRP LLMSAVTLDE NLEVLEDYLN SEFTPLLVNG ERYRGVLAMY
GHRSEMLNRN LGYHQYIPFD CLDREPREFL TLLRDYLQEV RESA
|
|---|
| |