| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1699 |
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| Symbol | |
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| ID | 6115940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2112291 |
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| End bp | 2113553 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633181 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001760079 |
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| Protein GI | 170726053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA CCCGCCTTCT ATTTCTGAAA GCACTCCTTG TCGTCGGAGT GATAAGCCTA
TCAGCTTGTA TTACCCCCAA CATGTCCCAT AGGGATAATG TTTGCCAAAG TGACAAAAAG
AAACAGAAAC TCAATCAAAT GAGTAGCAAA CAAAAGGAGA AAACTTGCCA CTACTACGGT
AATAAAACCC CCTACATGAG AGGGTATATC GCTGAGGTAG CAAGTAAAGA TACCCCTGCG
ACTAAAACCA TCACATCAGC TTCAGACTAT GCCTCATTTA CTAAACTGTT TAACACGCCA
CTCCTATCTG TGGGCGATAG AGTGAGCATC AAAATATTAA ATGGTGATGA GTTTAGTGCA
AAAGTCGAAG TTAACGCAGA CGGTTTTATC TATCTTCCTT ACCTGCCAGC CCTTAAAGCC
CACGGGGTAT CTATCCCCTC ACTGAAAAAG AACATAAAAC AGCTGTTAGT CGATGAAAAC
TTGATGCTTG AAGGCGCGAT CAGGTTAAGT ATTACCCCCC TAAGATGGGC ACCTATTCAA
GTCAGTGTAT CTGGTGCTGT GTTTGAACCT GGGCTGCACA GTATCAACCG TAAATCAGAT
ACAGAGATCA AAGATGATGA TGGTGGGCAT TCAGGTGATC AAGCCGCAGG CAGAAGCATC
TATATGGCCT TAAAAGCATC TGGCGGTATC AGCCCAAATG CCGACATTAG TCGGATAGTA
ATCACCCGAG GTCGGCATAT CATTGAAGTA GATCTCACAG GGGTAATTAA TGGAGACCCT
GTACCTCGCC TAACTTTAAT GGCCGAAGAC CATATCCATG TGCCGCAAAA TACTCACTTT
GATGATTCAC TCGCTAGGCC ATCACAGATC ACCGCGCCTG GTATTCGTGT TTTCATCTCT
AATCTGACTC AACCTGCAAG CAGCAATGCT CAATCTGCCG TTGATACAGA AGCAACTCGA
TTCCCCTATG GAACACGCTT ATTAACAGGT GTTATTGGCG GTAACTGTGT TGGGGGGGCT
CAAAGTACCA ATGCAAGTAG GCACGTTGTA CTTGTAACAA AAAACCCTAT TACTCAAGAG
GTTGATGTCG TTGAACGCTC TGTTGATGTC CTGATGTCGC AATCTTGGAA ATCACACATA
AACCCAGTAC TGCTTCCTGG TGACGGAATA GCCTGCTATG ACTCTGGTGT CACCAATATA
CGTGAAATAG CACGAACAAT AACTGAGATC ATTGTTCCTG CCACCTTACT CGGCATACTT
TAA
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| Protein sequence | MKTTRLLFLK ALLVVGVISL SACITPNMSH RDNVCQSDKK KQKLNQMSSK QKEKTCHYYG
NKTPYMRGYI AEVASKDTPA TKTITSASDY ASFTKLFNTP LLSVGDRVSI KILNGDEFSA
KVEVNADGFI YLPYLPALKA HGVSIPSLKK NIKQLLVDEN LMLEGAIRLS ITPLRWAPIQ
VSVSGAVFEP GLHSINRKSD TEIKDDDGGH SGDQAAGRSI YMALKASGGI SPNADISRIV
ITRGRHIIEV DLTGVINGDP VPRLTLMAED HIHVPQNTHF DDSLARPSQI TAPGIRVFIS
NLTQPASSNA QSAVDTEATR FPYGTRLLTG VIGGNCVGGA QSTNASRHVV LVTKNPITQE
VDVVERSVDV LMSQSWKSHI NPVLLPGDGI ACYDSGVTNI REIARTITEI IVPATLLGIL
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