| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1693 |
|---|
| Symbol | |
|---|
| ID | 6115934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2102630 |
|---|
| End bp | 2104075 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641633175 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001760073 |
|---|
| Protein GI | 170726047 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAA TTATCTTCGC AAATAGAATA GGTGATGAAC TCGCCCCCCT TGATCAGCAC
TATTGCCCTG CATTACTGCC TGTAGGCAAC AAACCTGTCA TTGAATATAC CTTAGAGGAT
ATCGCCACCT CAGGGATCTC TGAGGTTAAG TTAATCATCT CATCACAAGC TCAAGAGGTT
GAGCAACAAC TTGGTGATGG AGAGCGATGG GGGATTAGAA TTGAATACTT TTTAAGTAAA
CCACAAGAGA AAACGAAATC AGTACTCAAC CGGTTATCTC TACCTTCTAA TGAATCAATA
CTGATCATCA GAGGTGATAT TTTCCGCTCC CCCTGTATCG CTAGCTTTAT CAACTTCTCT
AGACAATTTC CTAACGAATT TGTACAAGCC AAAATGGCCA ATGAAAACGC TGGTATGTCA
ATGCTACCAG CCGCACAGCC CTATCTTGAT GGCATTGACT GGCCTCTTAT CAATCATGGT
GAAAACAACA GTGTCGTCAC TCTGGTACTG CATGGCCTTT GCAATATGCT CGATAGTTTC
CAGGCATATT TGCAGGTGAA TTTAAGTTTA GCCAGAAATG ATATTCCAGC CTTGACCCCA
ATGGAGCGCA GTTTCACATC CGCCAATCCA GAACAAGACT TTTATGTAGG AGCGAAAGCC
GATACTCAAG GGCTAGATAA ACAGCATGCT TGGGGGATCA TTGGTGAAAA CAGCAAGGTA
GACCCCAGCG TTGAGATGAA GAACACTGTC ATCATAGGTA ACGATACGCT GATCGACAAA
GGCTCGGTGC TAGAGAGTTG TTTAATTCTG CCGCACACTT ATGTTGGCGA AGGGCTAGAG
GTTAATAACA GCATACTATG TAAAAACTTG CTGATTAATT TAAATACTGA CGGCCACATC
CTAGTAGACG ATCAAGCCTT AATAGGCCCC AGCCAGCTTG AAGCCAATAT CATACCTTCG
CAAACACACT TTATGACTCG TCTGTTTATC CTTGCTATTT TGCTTATTAG CCTACCATTT
TGGCCTCTTC TAGCAACTTA TTCCCTTATC AGAGTGCTCC TTCTCAAACT AAAAGCAAAG
CCCATTATTC AAGAGATGAT TAATGACAAC TTAGGCCAAA GTCTCGTTGT TTACTCATTC
AATACTCCGA CTCGCATTAT CTCACTCCTT CCTCAGCTTT GTTTGGTGCT TACAGGTCAA
TTAGATCTCT TTGGCGCACC GGCTCAAATA CGCTATGCAA GTGGACAAAA TAAACATCGA
CTTGGTGTAT TCGGCCCCGT CCAGTTACTT CTTGATGAGG ATGCTCCAGA GGAGGAGCGA
TCACTTTTAA TGCTAGAATT TGACAATAAT TCCAGTAACA CCAAATACCT ATCTCTACTG
AAACAATCAC TGTTCATGCC TAAAGCTTTG CACTCACAAG AGAGTGTCAA CAAGGCGATC
TATTAA
|
|---|
| Protein sequence | MQAIIFANRI GDELAPLDQH YCPALLPVGN KPVIEYTLED IATSGISEVK LIISSQAQEV
EQQLGDGERW GIRIEYFLSK PQEKTKSVLN RLSLPSNESI LIIRGDIFRS PCIASFINFS
RQFPNEFVQA KMANENAGMS MLPAAQPYLD GIDWPLINHG ENNSVVTLVL HGLCNMLDSF
QAYLQVNLSL ARNDIPALTP MERSFTSANP EQDFYVGAKA DTQGLDKQHA WGIIGENSKV
DPSVEMKNTV IIGNDTLIDK GSVLESCLIL PHTYVGEGLE VNNSILCKNL LINLNTDGHI
LVDDQALIGP SQLEANIIPS QTHFMTRLFI LAILLISLPF WPLLATYSLI RVLLLKLKAK
PIIQEMINDN LGQSLVVYSF NTPTRIISLL PQLCLVLTGQ LDLFGAPAQI RYASGQNKHR
LGVFGPVQLL LDEDAPEEER SLLMLEFDNN SSNTKYLSLL KQSLFMPKAL HSQESVNKAI
Y
|
|---|
| |