| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1675 |
|---|
| Symbol | |
|---|
| ID | 6115916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2071907 |
|---|
| End bp | 2073214 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641633157 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760055 |
|---|
| Protein GI | 170726029 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AAACGAACAT AGCTTTTAAA CTACTACCAT TGACTCTGGC AATCACCATG
TCGATGGCAA CTTCAGTACA AGCCGATCAG GTAATACTCG ATGATCTCAT CGTAGATGGC
AGTATCTGTA CCGGAATGGA TTGCGTCAAC GGTGAATCTT TTGGATTTGA TACATTAAGA
TTAAAAGAGA ATAATCTCAG AATAAGATTT ATGGATACCA GTTCAACTTC CAGCTTCCCA
AGTCGAGATT GGCAAATCAC AGCCAATGAT AGTGCCAATG GCGGGTTAAA CAAGTTCTCA
ATCGATGATA TAGACGGTGC AAAAACACCA TTCACCATTG AAGCAGGTGC TGGTAGCCAC
TCTTTATACG TCGATGATGC AAGTAGAATA GGGATAGGAA CAAATGCTCC TGTCGTACAA
GTACACGTCA AAGACGGTAA CACCCCTACC CTACGCCTAG AACAAGACGG CAGCTCAGGC
TTCACCCCCC AAACCTGGGA TGTCGCCGGT AACGAATCCA ACTTCTTTAT CCGTGACGCA
ACTAATGGCA GTAACCTAGT TTTCAGAATA CAGCCTAGTG CACCAGCAAA TAGTATATTT
GTAGCCAATG ATGGTGATGT GGGATTAGGT GATGCTACTC CTGATGCGGC TCTAGACATT
GAATCTGGCG ATCTGATGCT CACTGATGGT CAAGTAACAA TTAGAAAAAC AAATGACCCC
AAGATATTAT TCAATGAAAA TGATGTAGTT ACTGATCAGT GGGAAATGGG AGTAGCAGAC
GTGTATGGCA ATTCAATGAC AATTCTGAAT AAAGACAACC CACTCATTGG CTACGCTATG
TATAACACCG GCGATATCTA TATGAATCAC GGTGTTGATG CTGCTTCACA AGGAAATAAA
TACGCATGGC ACTTATTGGC TAACGGTAAC ATTGAGCAAA CAGGCGATCT TTGGGTTGGA
GGAAATATAA CAGCACAAGG AACTATTAGC CCAGGTTCAA GCCGCGCAAC CAAAAACAAC
ATAAATTTGA TTGATGGAAA CAAAATATTA GATATGTTGA GTGATCTAGA TATCTTTTCT
TGGTCATATA TCCGTGATGC AGGAACTGTG ACTCATATAG GTCCAATGGC TGAAGAGTTT
TATGCCTTAT TTAATTATGG TGTGGATAAC AAGCATATCT CACCAACAGA TACTTCAGGT
ATATCATTAG CTGCAATTAA AGCATTAATG GATAAAGTTG AATCACAGAG TTCAAAAATA
GAGCAACTTG AAAATACCCT TGTTCAGCTA CAGAATAAAC AACGATGA
|
|---|
| Protein sequence | MKNKTNIAFK LLPLTLAITM SMATSVQADQ VILDDLIVDG SICTGMDCVN GESFGFDTLR
LKENNLRIRF MDTSSTSSFP SRDWQITAND SANGGLNKFS IDDIDGAKTP FTIEAGAGSH
SLYVDDASRI GIGTNAPVVQ VHVKDGNTPT LRLEQDGSSG FTPQTWDVAG NESNFFIRDA
TNGSNLVFRI QPSAPANSIF VANDGDVGLG DATPDAALDI ESGDLMLTDG QVTIRKTNDP
KILFNENDVV TDQWEMGVAD VYGNSMTILN KDNPLIGYAM YNTGDIYMNH GVDAASQGNK
YAWHLLANGN IEQTGDLWVG GNITAQGTIS PGSSRATKNN INLIDGNKIL DMLSDLDIFS
WSYIRDAGTV THIGPMAEEF YALFNYGVDN KHISPTDTSG ISLAAIKALM DKVESQSSKI
EQLENTLVQL QNKQR
|
|---|
| |