Gene Swoo_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1593 
Symbol 
ID6115834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1985065 
End bp1985394 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content42% 
IMG OID641633076 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_001759974 
Protein GI170725948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.776768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCTA TTGATATTAA ACAAGTAAAC TCCGCTGCTA ACGCCCATGT AAACAAGGCA 
TCAGCGAACA AAACCAACAC TCAAACGAGT CAAGCTGGTA ATAATGCTAG TTCAATTAGC
ACGCCTCCTA AAAGTGACTC AGTGTCGATC ACTTCTCAAG CTCAACAACT GCAGAGCATC
CAAGCAAAGT TGAGTGACAT TCCTGAAGTG AATAAGCAGA AAGTTGCTGA AATTAAACTT
GCGATCGCTG AGGGACGCTA TAAAGTCGAT CCTGAAAAGC TTGCTAGCAA CATCGCTATG
TTTGAAAATG AACTCAAGGA TCTCAATTAG
 
Protein sequence
MMAIDIKQVN SAANAHVNKA SANKTNTQTS QAGNNASSIS TPPKSDSVSI TSQAQQLQSI 
QAKLSDIPEV NKQKVAEIKL AIAEGRYKVD PEKLASNIAM FENELKDLN