| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1579 |
|---|
| Symbol | |
|---|
| ID | 6115819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1969747 |
|---|
| End bp | 1970727 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641633061 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001759960 |
|---|
| Protein GI | 170725934 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA TCGCGGTCAT CGGCCTTGGT AACATAGCTA AGCGTCATAG ACAAAACCTG
AAATTCATCT ATCCAGATGC AAAAGTTATT GCTCTTTCTG CCAGTGGCAG AATCGCTGAC
GAAGAGATAG AGTTTGCCGA TCTTCAGCTC TCAAGTATTG AAATGCTCAT CGACAGCCAA
CCTGAATTGG TGATTGTCGC TTCACCTAGC CCTTTCCATG AGGCCCACGC AAGTGCGTTA
ATCCAACATG ACATCCCTGT TTTGATTGAA AAACCTTTGG CTTCAGAGCC AGAAAGCGCC
GACCGTATTC TAGGGCTAAC TCAACAACAC TCAGGGCAAG TGATAGTCGG GTACTGCCTG
AGATATCTTA GCTCTGCCAT CGAGGTTAAA CGCCTTTTAT CTCATAATGT TATCGGTGAT
ATATATAACT GTCAGGCTAG CGTGGGACAA TATTTGCCTG ATTGGCGACC TAATAAGCAT
TACACGCATT CAGTTTCCGC GAACAGATCG CTTGGCGGAG GTGCCCTCCT TGAATTAAGC
CATGAACTGG ATTACTTACA TTGGTTACTC GGTCCTTTAA CGCTAAGCTA TGCACAACTT
AGAAGCACCA AGGAGTTGGC ATTAGACGTT GAGGAGATTG CTGACCTAGT ATTAACAAAT
GACACTGGAT GCGTTTGCTC GCTTCATATG GATTTTGTTC AGAAACAAGC ACAACGAGAG
TGTACTTTTA TCGGCTCAAC AGGTCGGCTG CATTGGGACT TATTAACTAA TACTATCACT
CTTCACAATC ATGAAGGCGC ACAAGTACTC TACTCAGTTC CTCAGTGGGA TAAGAACCAA
ATGTACATCA ACATGGTCAC TGACTTTATC AACAATATTC AACGCGGTGA GTGTACAACA
GCATCCTTAG AAGATGCCTG TCATACAGTC AACTTGATTG CTCAAATTAA ACAGCAGGCG
ACGTGGGGAG TCACCCAATG A
|
|---|
| Protein sequence | MKTIAVIGLG NIAKRHRQNL KFIYPDAKVI ALSASGRIAD EEIEFADLQL SSIEMLIDSQ
PELVIVASPS PFHEAHASAL IQHDIPVLIE KPLASEPESA DRILGLTQQH SGQVIVGYCL
RYLSSAIEVK RLLSHNVIGD IYNCQASVGQ YLPDWRPNKH YTHSVSANRS LGGGALLELS
HELDYLHWLL GPLTLSYAQL RSTKELALDV EEIADLVLTN DTGCVCSLHM DFVQKQAQRE
CTFIGSTGRL HWDLLTNTIT LHNHEGAQVL YSVPQWDKNQ MYINMVTDFI NNIQRGECTT
ASLEDACHTV NLIAQIKQQA TWGVTQ
|
|---|
| |