Gene Swoo_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1571 
Symbol 
ID6115811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp1962193 
End bp1962816 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID641633053 
ProductTetR family transcriptional regulator 
Protein accessionYP_001759952 
Protein GI170725926 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAA CTCCAACTGC TAATCTAAGC CGCAGTGAAC AGAAGCGAGT ACAAATTCTT 
GAAGCTGCAA TCGATCTGTT TTGTGGGCAG GGCTTCCCTA ATACCAGTAT GGACGAAGTT 
GCTAAAAAGG CTGGCGTCTC TAAGCAAACT GTCTACTCTC ATTTTGGCTG TAAAGACGAC 
CTTTTTGTGG CATCAATTGA ATCTAAATGT GTGGTACACA ATTTAACAGA AGAGCTTTTT 
GCCGATCCTC ATCATCCAGA AAAAGCCTTG GCAAGTTTCG GTGAATATTT CAGTGAGATG 
ATTGTGAGTC CCGAAGCGCT CAAGGTCTTC ACCGCATGTG TGGCACAGGC TGAAACTCAT 
CCAGAGATCT CTGAGCTCTT CTATAATGCC GGTCCAGAGC ATCTACTTAA CCTAATGTCA 
GACTATTTGA CCTTAGTTGA ACAAGCTGGT GTTTATCAAT TTGGAAATAC AAGAAGCTGC 
TCTGTGCGTC TTTGCTTGAT GATGTTTGGT GAGATGCGGA TGAAACTGGA GTTGGGATTA 
GGAGTTGAGG AGCTTATTGA AGGTCGTGAG GCCTATATTC AAGAGTGCGT CGATATGTTT 
TTAAGGGCTT ATAAGCTTAA ATGA
 
Protein sequence
MTSTPTANLS RSEQKRVQIL EAAIDLFCGQ GFPNTSMDEV AKKAGVSKQT VYSHFGCKDD 
LFVASIESKC VVHNLTEELF ADPHHPEKAL ASFGEYFSEM IVSPEALKVF TACVAQAETH 
PEISELFYNA GPEHLLNLMS DYLTLVEQAG VYQFGNTRSC SVRLCLMMFG EMRMKLELGL 
GVEELIEGRE AYIQECVDMF LRAYKLK