| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1528 |
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| Symbol | |
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| ID | 6115768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1904877 |
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| End bp | 1906283 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633012 |
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| Product | malate synthase |
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| Protein accession | YP_001759911 |
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| Protein GI | 170725885 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.339488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0605709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAG AAGTGATACA TAATGCACAG CAGGGAGCTA TGGACGTGGC TCAGCTTGGA
CTCGATGCAA ATTGTGATGT CGCAGCTCAT CTACAAGCAG GTTATATCAG TGCTCCAGTT
GAAACCAATA AGACGCAGGA GAGGCTTAAG GTTAATGGTG AAGTTGTTGA TGGTCAGGAT
AAGGTGTTAA ACGAGGGGGC ACTGAGCCTG CTCTCTAGTT TGTGTCGTCA GTTTGCTGCT
GAAGTTTCTG AGTTATTAGA GAATAGAAAA AGCCAACAAG CCAAGTATGA TGCAGGCGGC
ACTCTGGATT TTTTACCTCA AACTAAAGCC GTTAGAGAGG GGAATTGGCA AGTTAGAGGG
ATCCCTGCAG ACCTCATTAA TAGAAGAGTG GAGATTGCCG GTTCTGTTGA TCCATTGATG
CTCATTAATG GATTAAACTC GAATGCAAAC GTGTTTGTGG CTGATTTAGA GGAGTCACCT
GCATCGAGCT GGAATGAGTT GATTGAGAAG CAAGTTAACT TACGAGGTGC TGTGCGTGGG
GAGATTGAGT TCACCTCACC AGAGACTGGT AAATATTATC TGTTAAATGA TGCTCCTGCC
GTGCTGTTCT GCCGAGTTCG TGGCCTACAT ATGGTTGAAC ATCATCTTGA GTTTGATGAA
GCCGCTATTC CAGCTGCTTT ATTCGATTTT GCTCTCTACT TTTATAATAA CTATCGACAG
TTATTAGCTA AGGGCAGTGG TCCCTATTTT TATTTGCCTA AAATGGAAAG CCATCTAGAA
GCAAAATGGT GGGCTAAGGT TTTTGCTTTT GTTGAGGAGC GTTTCTGCTT ACAGCCTGGC
ACCATCAAAT GCACTTGTTT GATTGAAACT TTGCCAGCTG TTTTTGAGAT GGATGAGATC
TTATTTGAGC TGAGATCCAA TATCGTGGCG CTTAATTGTG GACGCTGGGA TTCAGACTTT
AGTTACATTA ATACTGGCCG AAACCATAGT GATGAGTTAT CGACTGATAA ACAGATGTTT
ACCGTGGGAG AGTCGTTTTT AAGTGTCTAC TCTCGTCTGT TAGTCAAGAC GTGTCATAAG
CGTGGTGCAT TAGCGATTGG GGGAGTGGCA ACCTATTTTC AGGCTAAAAC GAATGAAATC
AGTGCAGAAC GACTCGAAAA AATTCGTATC GATAAAGAGC TAGAAGCTAG AAATGGGCAT
GATGGAACTT GCGTTGAACA TCTAGAGTTA GTGGACGCTG TCACGGAGAT ATTTAATCAA
TATATTGGAG CAGAACAGGC CAACCAACTT CATATTACTC GTGATGTTGA TGGTCCTATT
AGTGCAAGAG AGCTGCTACA AGGCGTTGGA ATTACAACTA ACGTTAGGCT GGATATCAGA
GCTGATAGCG AGTCAAATGC CGCCTAA
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| Protein sequence | MAQEVIHNAQ QGAMDVAQLG LDANCDVAAH LQAGYISAPV ETNKTQERLK VNGEVVDGQD
KVLNEGALSL LSSLCRQFAA EVSELLENRK SQQAKYDAGG TLDFLPQTKA VREGNWQVRG
IPADLINRRV EIAGSVDPLM LINGLNSNAN VFVADLEESP ASSWNELIEK QVNLRGAVRG
EIEFTSPETG KYYLLNDAPA VLFCRVRGLH MVEHHLEFDE AAIPAALFDF ALYFYNNYRQ
LLAKGSGPYF YLPKMESHLE AKWWAKVFAF VEERFCLQPG TIKCTCLIET LPAVFEMDEI
LFELRSNIVA LNCGRWDSDF SYINTGRNHS DELSTDKQMF TVGESFLSVY SRLLVKTCHK
RGALAIGGVA TYFQAKTNEI SAERLEKIRI DKELEARNGH DGTCVEHLEL VDAVTEIFNQ
YIGAEQANQL HITRDVDGPI SARELLQGVG ITTNVRLDIR ADSESNAA
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