| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1409 |
|---|
| Symbol | |
|---|
| ID | 6115649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1768978 |
|---|
| End bp | 1769406 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641632897 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001759796 |
|---|
| Protein GI | 170725770 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAA ACGATAAAAC AAGAGCAACA CTCGTCGCGG GAAAAGCTAA ACCAAGAGGT
AGCTTCCCCC ACCTTAAACG TGCTGGCGAT TTTATCTATG TTTCTGGCAC AAGCTCAAGA
TTGCCAGATA ACAGCTTTGC TGGTGTTGAG GTCGATGAGA TGGGTGCAAC CAATCTAGAT
ATTGAAGTTC AAACTCGCGC AGTGATTGAC AATATTCGAG ACCTATTGCG ATCCGTCGAT
GCCGATTTAA CCGATCTAGT CGAAATCAGC ACCTTCCTCG TCAACATGAA TGACTTTGCC
GGCTACAACC GTGTCTATTC AGAATACTTT GACTACAGCG GGCCAACTCG CACCACAGTT
GCAGTACATC AACTGCCACA TCCGCACCTT TTGATTGAGT GTAAAGCCGT GGCCTACAAG
CCGCTCTAG
|
|---|
| Protein sequence | MKPNDKTRAT LVAGKAKPRG SFPHLKRAGD FIYVSGTSSR LPDNSFAGVE VDEMGATNLD
IEVQTRAVID NIRDLLRSVD ADLTDLVEIS TFLVNMNDFA GYNRVYSEYF DYSGPTRTTV
AVHQLPHPHL LIECKAVAYK PL
|
|---|
| |