Gene Swoo_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1397 
Symbol 
ID6115637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1755248 
End bp1755724 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content41% 
IMG OID641632885 
Producthypothetical protein 
Protein accessionYP_001759784 
Protein GI170725758 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.729553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGTTT ATCTATTTGA TTGGGGTGAT ACTCTGATGG TCGACTTCCC ACATACTCAA 
GGAAAAATGT GCGACTGGGA GCAGGTTGAA ACCATAGAGG GTGCGCAAGA GACCCTAAGC
TATCTCTCCA AACAGAGCCA AATCTATATC GCCACTGGCG CCGATGACTC ATCAGAGACT
GACATCAGGC AGGCATTTGA ACGTGTGGAT TTAGCTCAAT ATATCTCAGG TTATTTTTGT
AAGGCAAACT TAGGCATCTC AAAAGACTCA ACAGAATTTT ATACACGAAT CATCAGAAAG
TTAGGCCTAA CACCATGCCA AGCCATTATG GTTGGCGATA CGATTAGTAA GGATGTAATT
CCAGCGCAAC AAGCCGGATT AAATGCAATC TGGTTTAACC CAAATAGATT AAAAAATGAG
AAAAGCTTAA AACAGATCCA CTCTCTCAAA GAGTTATACA TTCAGGAGCA AGTTTAA
 
Protein sequence
MQVYLFDWGD TLMVDFPHTQ GKMCDWEQVE TIEGAQETLS YLSKQSQIYI ATGADDSSET 
DIRQAFERVD LAQYISGYFC KANLGISKDS TEFYTRIIRK LGLTPCQAIM VGDTISKDVI
PAQQAGLNAI WFNPNRLKNE KSLKQIHSLK ELYIQEQV