| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1351 |
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| Symbol | |
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| ID | 6115591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1701535 |
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| End bp | 1703058 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632839 |
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| Product | BCCT transporter |
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| Protein accession | YP_001759738 |
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| Protein GI | 170725712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000646817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAGAA AACCTGAGCA CCTGAACACC TCACCAGCTC CTATAAAACA TCGCATTAGT
AAAGAGAAGA TAGGCTTTAT CTCCTGTCTG CTTTTGGCCG CCACTTTTCT CCTATTTCCT
GGCACTGCGG TGACTTTTGC CGCCAGTATC TCTGACTATG CAATTAAGGA GTATGGGCTG
GGTTTTATCG TATTTCCTTC ACTCTTGGTT ATTCTGTCAC TGCTCATCGC CTTTACCCCA
TTTGGTAAAG TGAGATTAGG GGGCTGGGAT GAGAAGCCTG AGTTTGGTTT TATCAGTTGG
ACCGCCATGC TATTTGCTGC GGGGATGGGA TCTGGTTTGA TCTTTTGGGG GGTGGCTGAG
CCTATTGTGC ATTTTGCGCA TCCGCCGAGT TTCGTGGCGG ATACACCGCT GACATCGAAT
GTTGAAGATG CTAAAGATAC TGCTCTGGCA CTGACCTACT TCCATTGGGG CGTTCATGCT
TGGGCAGTTT ATGCCATCAG TGGCTTAGTG ATGGCTTGGT TTGCCTTTAA TCGTGGGCGA
GCTATGACCA TTTCGGCGAG TTTTACCGAT AAAGCCAAGG GGGGAAGGTT TCAGGTTTTT
GACTTTCTAG CTGTAATCGC GGTTATCTTC GGTGTCGCGG GAACTTTAGC TAACACCATT
GCGTTGGTGC AAAGTGGTTT ACAGCAGGTT CTGCCTTGGG ATATTGCTGG TTTGATATTT
CGATTAGTTC TGCTTATGGC TATCGCATTG GCCTTCACGC TCTCATCAAC TCTTGGACTT
GATAGGGGGA TTAAGCAGAT GAGTCTGTTT AACTTGCTGT TTGTTATCGC CATACTGCTG
GTCGTTGTCA GCATTGTGGA TCCCTTTGCG GTTGCTGAAA CCTTGGTTAC TTCAACGGTG
AGTTATATCA GTTTGCTTCC CTCGCTCTCC TTTACTATCG ATCCCAGTTC TCGGGCTTGG
AGTGAAGGGT GGAGTATCAT CTATTTTGTC TGGTGGATTG CCTGGGCACC CTTTGTCGGT
CCATTTATTG CGAGGATTAG CAAAGGACGT ACGGTTCGCC AATATTTGCT GTGTACGATA
TTTGTTCCAA CACTTACCAC TATCGTCTGG TTCAGTGCTT TTGGTGGAAG TGTATTTGAG
ATGAGCATTT TGGACGATGT GATTGCGGCG ACCAATAGTG ATGTAACTTA TGGCCTGTTT
ACCTTTTTCG ATGCTATCCC CTACGGAAAA ATACTAACCT ACAGTGCGAT TTTATTACTG
GTGACCTTTG TTATCACCAG TGCCGATTCT GCTATCTATG TCAGTGGTAT GCTAACAGGT
AGCAGTCAGT TAGGGTCTAA ATTGATGTGG AGTTTAACCT TAGTGGCGAT CACAATCGCG
CTATTATTGA AAAACGATAT TGAGTTGAAT AAGCAGATAG CTATTTTAGG GGCTGTGCCA
TTTACCTTAA TTTTAATGGC ACAGACCTGT ATTTTACTCA AAGAGATGTT CAACCATAAA
AGGGTTGTGG ATAGTGACGA GTAG
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| Protein sequence | MNRKPEHLNT SPAPIKHRIS KEKIGFISCL LLAATFLLFP GTAVTFAASI SDYAIKEYGL
GFIVFPSLLV ILSLLIAFTP FGKVRLGGWD EKPEFGFISW TAMLFAAGMG SGLIFWGVAE
PIVHFAHPPS FVADTPLTSN VEDAKDTALA LTYFHWGVHA WAVYAISGLV MAWFAFNRGR
AMTISASFTD KAKGGRFQVF DFLAVIAVIF GVAGTLANTI ALVQSGLQQV LPWDIAGLIF
RLVLLMAIAL AFTLSSTLGL DRGIKQMSLF NLLFVIAILL VVVSIVDPFA VAETLVTSTV
SYISLLPSLS FTIDPSSRAW SEGWSIIYFV WWIAWAPFVG PFIARISKGR TVRQYLLCTI
FVPTLTTIVW FSAFGGSVFE MSILDDVIAA TNSDVTYGLF TFFDAIPYGK ILTYSAILLL
VTFVITSADS AIYVSGMLTG SSQLGSKLMW SLTLVAITIA LLLKNDIELN KQIAILGAVP
FTLILMAQTC ILLKEMFNHK RVVDSDE
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