Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1349 |
Symbol | |
ID | 6115589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1698081 |
End bp | 1699712 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641632837 |
Product | alkaline phosphatase |
Protein accession | YP_001759736 |
Protein GI | 170725710 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.29054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000619726 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAAGA AACTACTGGT ACTGTCTTTG GCAGCAATCT TAGGTCTAGC TGCATGTGGC AGCGATGGTG ATAACGGTGC TAATGGTAAC AATGGCACCG ACGGAAACGA TGGCAGCAAT GGAACTGATG GTAAAGACTG GAGCTCTGTC AATGAGTGGT ACATTGACGG CCAACGCCGA GTGACTAAAG CGGCGGGATT TTCAGTCAAC AACGAAGCAG GAGCTGCCAA AAACATCATA CTGTTTGTCG GTGACGGCAT GGGCGTATCA ACGGTAACAG CCGCGCGCAT TCTCGAAGGG CAACTTAAAG GAGAAACTGG CGAGGAGAAC TCACTCTCAT TTGAAACTCT GCCTCATCTT GGTTTAGCCA AAACCTATAA CGTAGATGGA CAAACTCCAG ACTCAGCCGG CACCATGACG GCCATGGTCA CAGGGGTTAA AACCGATGTC GGCGTACTGT CCCAAGCTGA GGGAGTTACC CGAGGTAACT GCGCGTCAAC CACAAATCAA AACCTAGTGA CCTCCCTTGA ATTAGCCGCA ATGGCAGGTT TATCTACGGG GGTAGTGTCT ACTGCACGTA TTACCCATGC AACGCCTGCA GCTACTTACG CCCACTCACC TGAACGTAAC TGGGAGAGTG ATGCAGACTT GCCCGCTGAA GCGGTAACCA ATGGCTGTAG AGATATCGCC AGCCAGTTAC TCGACTTCGA TTTTGGCAGT GGCATCAATG TGGTAATGGG TGGCGGACGC CGCGCCTTTA TTCCAAACAC CTTAACCGAT GCTGAGGGGA AGAATGGCAA GCGTTTAGAT GGACGTAACC TGACCGATGA GTGGACAGCA AAATACACCA ACTCAGCTTA TGTCGAAGAC AGAGATAGCT TTTTAGCCAT TAATCCTGCA ACCACAGATC ATGCCCTTGG CTTGTTCAAC TCATCCCATA TGGAGTATGA CTACGACCGC ACAATTCAAG GTGTGACGGG GGAGCCTTCA CTGGCAGAGA TGACAGCTAA GAGCATCGAT ATTTTGAAGA AAAATGATAA GGGTTTTGTG CTGATTGTCG AAGCGGGTCG TATCGACCAT GCTCACCATG CAGGGAACGC AGCAAGAGCC CTCTATGACA CCATAGCCCT CTCTGAAGCT GTCCGTGTCG CCATGGAGAA AACCTCGACG AAAGACACAC TGCTTATGGT CACAGCCGAT CACAGTCATG TGTTTACCAT TGCCGGTTAC CCAACGCGAG GCAACCCAAT ACTTGGCCTA GTGAAGGGCA ATGACTCTTC TGGCCTGCCA GGCCCAACTA ATGCAACCGA CAACAATGGA CTGCCATACA CCACTGTGGG TTACACCAAT GGACGCGGCT ATGCCAACCT AAGCACAGGC GGTGATGAGC GTTATGGCTA CCCGGTAGAA ACTGGACGGG TCGATCTTAA CTATATCGAT ACTCAAAGTG CAGGCTTTCA CCAAGAAGCA CTTGTTCCGC TATCGAGTGA AACCCATGCA GGTGAAGATG TTGGTATATT TGCAAGTGGT CCAGGCTCTC ATCTCATTGA AGGCACTGTT GAGCAAAACC ATATCTTCCA TGTCATTAAT CATGCTGCCA ACTTAGTTGT CAAAGCTGAA GCTGCTCAGT AA
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Protein sequence | MNKKLLVLSL AAILGLAACG SDGDNGANGN NGTDGNDGSN GTDGKDWSSV NEWYIDGQRR VTKAAGFSVN NEAGAAKNII LFVGDGMGVS TVTAARILEG QLKGETGEEN SLSFETLPHL GLAKTYNVDG QTPDSAGTMT AMVTGVKTDV GVLSQAEGVT RGNCASTTNQ NLVTSLELAA MAGLSTGVVS TARITHATPA ATYAHSPERN WESDADLPAE AVTNGCRDIA SQLLDFDFGS GINVVMGGGR RAFIPNTLTD AEGKNGKRLD GRNLTDEWTA KYTNSAYVED RDSFLAINPA TTDHALGLFN SSHMEYDYDR TIQGVTGEPS LAEMTAKSID ILKKNDKGFV LIVEAGRIDH AHHAGNAARA LYDTIALSEA VRVAMEKTST KDTLLMVTAD HSHVFTIAGY PTRGNPILGL VKGNDSSGLP GPTNATDNNG LPYTTVGYTN GRGYANLSTG GDERYGYPVE TGRVDLNYID TQSAGFHQEA LVPLSSETHA GEDVGIFASG PGSHLIEGTV EQNHIFHVIN HAANLVVKAE AAQ
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