Gene Swoo_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1340 
Symbol 
ID6115580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1690729 
End bp1691298 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content42% 
IMG OID641632828 
Producthypothetical protein 
Protein accessionYP_001759727 
Protein GI170725701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00506631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000123504 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAG TTAAAGTAGT TTTGGCTGCA CTATCACTCT GTGCGCTTAG CGCGTGTAGC 
TCAATGAAAA CAAGTTCAGA TTATGATCCT GCGGCTAATT TCAGTGATGT CAAAACCTAT
GCTTGGGTAG AGAAGAAGAC GCAAGATAGC AGTTATCATC TGGATGGGTT AATGGATCAG
CGTGTTCGTA GTGCTGTTGA CAGTCAATTG TCGCTTAAGG GGGTTAAGTT AACCGAACCA
TCTACAGCGG ATGTGTTGGT TAACTACCTC ACTAAAGTTG ATAAGAAGAT AAATGTTGAT
ACTTTCAATA CCAACTATGG TTATAACCCA TATTATGGTC CTCGCTGGGG CATGAGTGGC
TCTATGCATA CCCAAACTAC AGTTCGTGAA TATGAAGTGG GTACATTGAT CTTAGATATG
GTTGATAGGG AGTCAGGAAA GCTTATCTGG AGAGGCTCTG TTGCCGATAC TATCCGTGAT
AAAAATACTC CAGAGGAGCG CATTGAGGTG GTTAATCAAG CAATCGCTGC CATGTTAATG
AATTACCCTC CAAAGCCAGA AGCTAAATAG
 
Protein sequence
MKQVKVVLAA LSLCALSACS SMKTSSDYDP AANFSDVKTY AWVEKKTQDS SYHLDGLMDQ 
RVRSAVDSQL SLKGVKLTEP STADVLVNYL TKVDKKINVD TFNTNYGYNP YYGPRWGMSG
SMHTQTTVRE YEVGTLILDM VDRESGKLIW RGSVADTIRD KNTPEERIEV VNQAIAAMLM
NYPPKPEAK