Gene Swoo_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1316 
Symbol 
ID6115556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1669957 
End bp1670508 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content39% 
IMG OID641632804 
Productcytochrome B561 
Protein accessionYP_001759703 
Protein GI170725677 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.171547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.725201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTA ATACTGAAGC CTCCTACGGG CTAGCTTCTA TTCTATTTCA TTGGGTTTCA 
GCCCTAGCTG TTATCTCACT ATTTGTTTTA GGTTATTGGA TGGTCGATCT GACCTATTAC
AGCACCTGGT ATAAAACAGC TCCCTATTTA CATAAGAGTT TTGGACTCCT ATTGCTGCTT
TTAACCTTAA TTAGGCTGGT TTGGAAAGTG GTTAATCCCA AACCTAAAGC CGATCCTAAT
CATAAAAGGT GGGAGCAAAA AGCTGGTCAT ATAGCCCATT TAGCAATCTA CCTTTTACTT
ATCGTTATTA TGTTTAGTGG TTATTTGATA TCAACAGCCG ATGCACGAGG GATCTGGGTG
TTTGATTGGT TTGAAGTACC AGGCTTTGGC TCATTTATCG ATGGGCAAGC AGATGTTGCA
GGTCTAATTC ATCAATATGC AGCTTATAGT TTGATGGGGT TAACATTAAT ACATGCCTTG
GGGGCCATAA AGCACCATGT AATAGATAAA GACTCAACCT TATTAAGAAT GATTAAGGTG
ATAAAGAGCT AA
 
Protein sequence
MFRNTEASYG LASILFHWVS ALAVISLFVL GYWMVDLTYY STWYKTAPYL HKSFGLLLLL 
LTLIRLVWKV VNPKPKADPN HKRWEQKAGH IAHLAIYLLL IVIMFSGYLI STADARGIWV
FDWFEVPGFG SFIDGQADVA GLIHQYAAYS LMGLTLIHAL GAIKHHVIDK DSTLLRMIKV
IKS