Gene Swoo_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1314 
Symbol 
ID6115549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1664998 
End bp1666134 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content44% 
IMG OID641632797 
Producthypothetical protein 
Protein accessionYP_001759701 
Protein GI170725675 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000126062 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTA CTCAAGCTAA GACCCCAAAA AGAAGATTGA TGTCACTCGA TGCTCTTAGA 
GGTTTCGATA TGTTTTGGAT TTTGGGTGGT GAGGCGCTTT TTGCTGGCTT ACTTCTGTGG
ACGGGTTGGC ATGGGTGGCA ATGGGCAGAT GCACAGATGC ACCACAGTCA ATGGCATGGC
TTTACCTTCT ACGACCTTAT TTTCCCGCTT TTTATCTTTC TTTCCGGTGT TGCTCTGGGC
CTATCCCCTA AACGATTAGA TAAGTTGCCA ATGGCACAAA GAATGCCTTT GTATAAGCAC
TCTGTGAAGC GTCTATTACT GCTGCTGTTC TTTGGTGTTC TTTATAATCA TGGCTGGGGA
ACTGGTGCAC CAGTTGCAAT CGATGAGGTT CGTTATGCCA GCGTTTTGGG AAGAATTGCT
TTTGCCTGGT TTTTTGCCGC CATGTTGGTT TGGCATACGA GTTTCCGTAC TCAGGTTTTA
GTAACACTTG GAATTTTAGT GCTTTACGGT TTGGCGCAGC TACTTATCCC TGTTCCTGGG
TATGGGGCTG GTATTTTTAG CCCAGAAGGG TCAATTAATG CTTATGTCGA TACTCATCTT
CTCCCTGGAA TAGCTTATCA GAATCGAGCT CTAGACCCTG AAGGGATACT GTCAACACTT
CCTGCGATAG TTAATGCAAT GGCTGGCGTA TTTGTTGGCC ACTTTATTGT TAAAGAGCAT
GCAAAAGGGG AGTGGTATAA GGTTGTGACG ATGTTAATTG CAGGAGCGTT AGTGCTTGGT
TGTGGTTGGC TGTTAAACCT TGTTATTCCA GTTAATAAAG ATCTATGGAC CAGCTCTTTT
GTTTTAGTGA CAACAGGTTG GAGCATGATC TTACTTGCTG TGTTTTATGC TGCTGTAGAT
GTTTTGAAGT GGCAGAAAGC TGCATTCCCA TTTGTGGTGA TTGGCTGTAA TGCTATCATC
ATCTACCTTG CGTCCAGTTT GATAGATTGG AAGTACACAG CCCAAAGTCT CTTTGGAGGT
TTGGTGAGTG CTTTTCCATC TTCAGCCCAA GAGCTAATGG CTGCGATTAG CTTGCTGCTC
GTGCAATGGT TAGTTCTTTT TTGGATGTAT AAGCGGGGAG TGTTCGTAAA AGTTTAA
 
Protein sequence
MEATQAKTPK RRLMSLDALR GFDMFWILGG EALFAGLLLW TGWHGWQWAD AQMHHSQWHG 
FTFYDLIFPL FIFLSGVALG LSPKRLDKLP MAQRMPLYKH SVKRLLLLLF FGVLYNHGWG
TGAPVAIDEV RYASVLGRIA FAWFFAAMLV WHTSFRTQVL VTLGILVLYG LAQLLIPVPG
YGAGIFSPEG SINAYVDTHL LPGIAYQNRA LDPEGILSTL PAIVNAMAGV FVGHFIVKEH
AKGEWYKVVT MLIAGALVLG CGWLLNLVIP VNKDLWTSSF VLVTTGWSMI LLAVFYAAVD
VLKWQKAAFP FVVIGCNAII IYLASSLIDW KYTAQSLFGG LVSAFPSSAQ ELMAAISLLL
VQWLVLFWMY KRGVFVKV