Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1314 |
Symbol | |
ID | 6115549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1664998 |
End bp | 1666134 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641632797 |
Product | hypothetical protein |
Protein accession | YP_001759701 |
Protein GI | 170725675 |
COG category | [S] Function unknown |
COG ID | [COG4299] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000126062 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTA CTCAAGCTAA GACCCCAAAA AGAAGATTGA TGTCACTCGA TGCTCTTAGA GGTTTCGATA TGTTTTGGAT TTTGGGTGGT GAGGCGCTTT TTGCTGGCTT ACTTCTGTGG ACGGGTTGGC ATGGGTGGCA ATGGGCAGAT GCACAGATGC ACCACAGTCA ATGGCATGGC TTTACCTTCT ACGACCTTAT TTTCCCGCTT TTTATCTTTC TTTCCGGTGT TGCTCTGGGC CTATCCCCTA AACGATTAGA TAAGTTGCCA ATGGCACAAA GAATGCCTTT GTATAAGCAC TCTGTGAAGC GTCTATTACT GCTGCTGTTC TTTGGTGTTC TTTATAATCA TGGCTGGGGA ACTGGTGCAC CAGTTGCAAT CGATGAGGTT CGTTATGCCA GCGTTTTGGG AAGAATTGCT TTTGCCTGGT TTTTTGCCGC CATGTTGGTT TGGCATACGA GTTTCCGTAC TCAGGTTTTA GTAACACTTG GAATTTTAGT GCTTTACGGT TTGGCGCAGC TACTTATCCC TGTTCCTGGG TATGGGGCTG GTATTTTTAG CCCAGAAGGG TCAATTAATG CTTATGTCGA TACTCATCTT CTCCCTGGAA TAGCTTATCA GAATCGAGCT CTAGACCCTG AAGGGATACT GTCAACACTT CCTGCGATAG TTAATGCAAT GGCTGGCGTA TTTGTTGGCC ACTTTATTGT TAAAGAGCAT GCAAAAGGGG AGTGGTATAA GGTTGTGACG ATGTTAATTG CAGGAGCGTT AGTGCTTGGT TGTGGTTGGC TGTTAAACCT TGTTATTCCA GTTAATAAAG ATCTATGGAC CAGCTCTTTT GTTTTAGTGA CAACAGGTTG GAGCATGATC TTACTTGCTG TGTTTTATGC TGCTGTAGAT GTTTTGAAGT GGCAGAAAGC TGCATTCCCA TTTGTGGTGA TTGGCTGTAA TGCTATCATC ATCTACCTTG CGTCCAGTTT GATAGATTGG AAGTACACAG CCCAAAGTCT CTTTGGAGGT TTGGTGAGTG CTTTTCCATC TTCAGCCCAA GAGCTAATGG CTGCGATTAG CTTGCTGCTC GTGCAATGGT TAGTTCTTTT TTGGATGTAT AAGCGGGGAG TGTTCGTAAA AGTTTAA
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Protein sequence | MEATQAKTPK RRLMSLDALR GFDMFWILGG EALFAGLLLW TGWHGWQWAD AQMHHSQWHG FTFYDLIFPL FIFLSGVALG LSPKRLDKLP MAQRMPLYKH SVKRLLLLLF FGVLYNHGWG TGAPVAIDEV RYASVLGRIA FAWFFAAMLV WHTSFRTQVL VTLGILVLYG LAQLLIPVPG YGAGIFSPEG SINAYVDTHL LPGIAYQNRA LDPEGILSTL PAIVNAMAGV FVGHFIVKEH AKGEWYKVVT MLIAGALVLG CGWLLNLVIP VNKDLWTSSF VLVTTGWSMI LLAVFYAAVD VLKWQKAAFP FVVIGCNAII IYLASSLIDW KYTAQSLFGG LVSAFPSSAQ ELMAAISLLL VQWLVLFWMY KRGVFVKV
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