| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1144 |
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| Symbol | |
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| ID | 6115378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1470094 |
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| End bp | 1473090 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632627 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001759532 |
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| Protein GI | 170725506 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.503724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTA AGCATTTTAC TAAAACTAAA CTGGCTAGCA GCTTGTCCTT AATATTGGGG
GTAAGCGGTA TCATGCCTGC TATGGCTGCA GATGATACTA GCCAAGATAA AAATATCGAA
GTGATTCAGG TTTCAGGTAT CCGCGGCAGT TTAATTAAAT CAATGGATCT TAAGCGTGGC
TCAGAAGGAA TTGTCGATGC CATTAACGCC GAGGACATAG GTAAGTTCCC CGACAGTAAC
TTGGCTGAAT CACTACAACG TATCACCGGC GTTTCAATCG ATCGTCAAAA CGGCGAAGGT
AGCCGAGTAT CGGTTCGTGG TTTCGGTGCC GATCAAAACT TAGTCCTACT TAATAATCGC
CAGATGCCTG TGACCACAGG ATCTCGCTCT TTTGATTTTG CCAATATCGC ATCAGAGGCC
ATTAGCGCCG TTGAAGTAGA GAAAACAGCG CAAGCATCAA ACCCAACGGG TGGTATTGGT
GCCACTATCA ATGTATTGAC CCACAGACCA CTAAGCTCTC CAGGTCTAAA AGCCTCTTTT
GGGGCTAAAG CCGTTGATGA CTCATCAACA GATAAAGGCT CTGTCACTCC TGAGTTATCA
GGCCTGTACT CAAATACCTT TGCCGATGAC AAATTCGGGA TCTCTATTTC AGGCAGCTAT
CAGGAACGTG AAAGTGGTAA TCAGCAAGCA CAAGTTGGAA CAGGCTGGCG CAGTTTTCCT
GGCATAGTCG ACCAAGATTG GGCTGGTTCA AATGCTGAAT GGGGCGGCGT ACCAAAAGAT
GCAAATCAGA TAAATCGTCC AGGTGACGAT GATGTGTATA GCGTACCGCA AACCACAGTC
TATCGATTTG AAGAGCAGCA GCGTAAACGT ACCAATGGTC AACTCGTGCT GCAATATCAG
CCAACAGATT CAATTCGTAC CACCCTCGAC TACACCTATA TGCGCAATGA TGTCGATACT
CAATTTCACG ATGTCTCAGC TTGGTTCAAC TTTGTGCCAA CACAGGAGAG TACGTGGAGC
GATGGCCCTG TCTCCTCGCC ACTGGTTTAT TCTGAACTTT ATGATGCACC AGCGGATCTC
TCTATGGCGG CTGGTGACTA TGGCACCCGA GATCAAAGTG GTTCATTAGG CTTAAATATC
GATTGGGAAG TGAGTGAAAA CCTCTCTTTA GCATTGGATT ATCATGACTC ATACGCAGAG
CGTACCCCTA ACAGTCCGAA CGGTAGTAGC AGCTTATTAA GCACAGCCGC TTTTGTTAGA
ACCAGTGCAG CGACAGACTT TACTGGTGAT GTGCCCGTAT TGGCCGTTGG CGGTGGCAAT
GCCGTTAGAC CTGAAGATAT GCGCGTGACA GGGTCAGTAT TTACCAACGC AATTAACCGC
TCAGAGATAG AGCAGTTACA GATTTCAGGA AGCTATGATC TTGAAGAGGC TGGCACTATC
GACTTTGGCA TAGCCATGAC AGATGTGAAT AACCACTCTC AATCGGTCAA TGTTCAGCGA
AACGATTGGG GAGGCGTTGG TTCAGAGGGA GATCTCGATG CAGCTTGGTT CCCACAAGAC
ACAGTATTGG ACAAGCTTGA TGGCTCACAA GGTGATTTCT CAGACTACCA AGGCTCGGCG
GCAACAGATC CACTAAACAC CATCTTCCTT TGGGACTTTG AAGCGGTGAG AGCTCGCGCA
GCAGAGCTTT ATGCATCGAG CGCCGTTGGT GACTGTGGTA ATGGGTTCTG CCCCTCAACA
GATTATGCCA GTGACACCGA TAGATTTACC CAAGAGGAGT CACAATCAGC CTATATTCAA
TATAATTATG CGGGTGACCT AGGCGATATG CCATTTGATG TGCATGTGGG CTTACGTTAT
GAAAAGACTG ACGTCACCTC AACCTCTGCA GTATCAGCCT ACGACACGGC AACTTGGATT
GCCGAAACTG AGATTGCGCT ATCGAGTTCA GCGGCTGATA ACCGAGTATT CCAGACCCAA
ACCGGTGATT ATGATTACCT ACTGCCAAGC GTAAACTTCA ATATTGAAGT GGTTGAAGAT
ATCTATGTCC GCATGGCGTT TAGTGAAACC ATAGGCCGTC CAGACTACAC CTCCATTCAA
GGTGGTACCA CAGTCGGTAC TCTTGCCAAC AGAGGCGGAG GCAGTGGCGA AGCCGGTAAC
CCGAGTTTGT TACCGTTAGA GTCAACTAAC TATGATATCT CAACGGAGTG GTACTATGAT
GAAGGCAGCT ACGTCTCTGT CGGCTACTTT AGAAAAGATG TCACTAACTT TATTAGCTCA
AACCCTGAAA ATTCAAACCT CTACAATATT CCAGATCCAT CAAATGGTCA GTATGTTCAG
GAAGCCATCG CGGCTGGTGC ATCAACTGCA ATTGAGCAGA GACAATGGAT TTTTGATAAT
TATGGCAGCA CAGATCCTAA CGTTAGCATC AACCCAGCTA ACGGCAATAT TGAGATAGCT
GGTAATCCTG GCGATCCGGA TCTCAACTTC CTCATCACTA AACCAACCAA CAGCGATTTA
AGCAATGTTA TCGACGGTTG GGAGTTTGCC ATTCAGCACT TCTTTGGTGA GTCAGGCTTT
GGCGTGCAGG CTAACTACAC CTTAGTTAAT GCAGGTGATA GCTACAATAA TGCCAACTTG
GGTCGCCCAG GAGATCCGTC GCAAAATGTG ATTAATGGTA TCAGTGACAC CGCTAACCTA
GTGGGTATCT ATGAAAACTA TGGATTTACA GCCCGTATCG CCTACAACTG GCGTGATGAG
TTTTTAAACT CTCAAGGACA AGGTACAGGT GCGAATCCAC AATACACTGA AGCCTATTCG
CAAGTTGATT TTAACATTGG CTATGACGTT CCAATGGTCG AAGGGTTAAC AGTCTTTATC
GAAGGTCTCA ACATCACAGA TGAGAATACT CGCGTGCATG GCCGTGCTAA TGAGCAGGTC
CTAAATTATA CACAAACTGG AGCTAGGTAC AGTTTAGGCG CACGTTACAC CTTCTAA
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| Protein sequence | MERKHFTKTK LASSLSLILG VSGIMPAMAA DDTSQDKNIE VIQVSGIRGS LIKSMDLKRG
SEGIVDAINA EDIGKFPDSN LAESLQRITG VSIDRQNGEG SRVSVRGFGA DQNLVLLNNR
QMPVTTGSRS FDFANIASEA ISAVEVEKTA QASNPTGGIG ATINVLTHRP LSSPGLKASF
GAKAVDDSST DKGSVTPELS GLYSNTFADD KFGISISGSY QERESGNQQA QVGTGWRSFP
GIVDQDWAGS NAEWGGVPKD ANQINRPGDD DVYSVPQTTV YRFEEQQRKR TNGQLVLQYQ
PTDSIRTTLD YTYMRNDVDT QFHDVSAWFN FVPTQESTWS DGPVSSPLVY SELYDAPADL
SMAAGDYGTR DQSGSLGLNI DWEVSENLSL ALDYHDSYAE RTPNSPNGSS SLLSTAAFVR
TSAATDFTGD VPVLAVGGGN AVRPEDMRVT GSVFTNAINR SEIEQLQISG SYDLEEAGTI
DFGIAMTDVN NHSQSVNVQR NDWGGVGSEG DLDAAWFPQD TVLDKLDGSQ GDFSDYQGSA
ATDPLNTIFL WDFEAVRARA AELYASSAVG DCGNGFCPST DYASDTDRFT QEESQSAYIQ
YNYAGDLGDM PFDVHVGLRY EKTDVTSTSA VSAYDTATWI AETEIALSSS AADNRVFQTQ
TGDYDYLLPS VNFNIEVVED IYVRMAFSET IGRPDYTSIQ GGTTVGTLAN RGGGSGEAGN
PSLLPLESTN YDISTEWYYD EGSYVSVGYF RKDVTNFISS NPENSNLYNI PDPSNGQYVQ
EAIAAGASTA IEQRQWIFDN YGSTDPNVSI NPANGNIEIA GNPGDPDLNF LITKPTNSDL
SNVIDGWEFA IQHFFGESGF GVQANYTLVN AGDSYNNANL GRPGDPSQNV INGISDTANL
VGIYENYGFT ARIAYNWRDE FLNSQGQGTG ANPQYTEAYS QVDFNIGYDV PMVEGLTVFI
EGLNITDENT RVHGRANEQV LNYTQTGARY SLGARYTF
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