| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1128 |
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| Symbol | |
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| ID | 6115362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1450255 |
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| End bp | 1450803 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632611 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001759516 |
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| Protein GI | 170725490 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGATATTG GAGCTAGTCT CAAGGCTGTC CGCAAAATTA AGGGGTTATC CCAGCGTGAG
CTTGCGAAAA GAGCTGGCGT CACCAATAGC ACTATCTCTA TGATTGAGAA AAACAGTGTC
AGTCCATCGG TAAGTTCCTT GAAGAAGGTG CTATCTGGAT TACCTATGTC GCTAGTCGAT
TTCTTCTCTA TGGAGGACAC GGCTGCAAGT GAAGCTAAAG TTGTTTATCG CAGTGACGAG
CTGCTTGATA TTGGCGATGG AAATTTAGAT TACAAGCTGG TGGGTCGGGA CTATCCCAAC
CGAGCTATGT CTGTGATGAG CGAAACCTAC CCACCTGGTT CTGATACTGG TGAAGAGATG
CTTAAGCATG AGGGTGAGGA AGCGGCCATC GTGATAGAGG GCAAGTTTGA GCTTACGGTC
GGTGACGAGG TGTTTATTCT TGAAACTGGA GATAGCTATT ATTTTAATAG TGAGACGCCC
CATAGGTTTA GAAACCCTTT CGATGAGGAC TGCCGAATAG TGAGCGCCAC CACGCCAGCT
AATTTCTAA
|
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| Protein sequence | MDIGASLKAV RKIKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LSGLPMSLVD
FFSMEDTAAS EAKVVYRSDE LLDIGDGNLD YKLVGRDYPN RAMSVMSETY PPGSDTGEEM
LKHEGEEAAI VIEGKFELTV GDEVFILETG DSYYFNSETP HRFRNPFDED CRIVSATTPA
NF
|
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