| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1118 |
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| Symbol | |
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| ID | 6115352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1437887 |
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| End bp | 1438804 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632601 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759506 |
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| Protein GI | 170725480 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAAA CTGATTATTT GGCATTGGAT GGCCGCCTAT TAAGGCTGTT TTTAACTGTT
TTTGATACCG GCTCAGTCTC TGGTGCTGCC GACAAATTAG ATCTTAATCA GTCAACGGTA
AGTAACGGCT TGGATAGATT GAGACGGATT ATCGGTGAGC CCCTGTTCGT TCGCTCTGGG
CGCGGGATAA TTCCGACTCA GGAAGCGAGT AGACTCGCGC CTTTAGCCAG AGAGTTACTC
GCAAAGTTTG AGCAGTTTGT TGAGGCTCAG GAGTATCGTG CTGAAGATGA GAGCAGACCC
TTTGTTATTG CTGCTAACGA TTATGAGCGA GATATATTGC TACCTCAGTT GTTGGTTAAA
TTAAGGCTGC TTGCGCCTAA TGCGCCCCTT AAGGTATTGA CGGCTGGAGC CAAAGAGACG
GTATTGGAGC AGCTTAGACA GGGAGAGATA GATCTGGTGC TGTCGCCGAG TATTGAGGCG
AATGTGGATG ATTTAAAACA GCAGTGGCTA TTTTCAGACT GTGATGCGGT TTTTTACGAT
CCTGAGGTGA TAAAGGGGCC GATCGATTTA GCCCAATATG TGGCGCTGCC CCATGCCAGA
GTTGTATTCA ACTACTCAGG TCGTTCAGAG ATAGATGAGG TGCTGACAGG ACTTAAACTT
GAGCGTGAGA TAAAGCTTGA GGTGGCAAAC TTCTCAGCAC TTTCCTCAAT GATGAGAGGG
AGTGAGCTTG TCACTACACT TCCCTCTAGA GTCGGTATTT CGCTGCTGGA TAAGATGGCT
CAACAAACTC CGCCAATCTC ATTGAACGAC ATCAATATCT ACCAGTTTTG GCATCAGGCC
TACACCCACT CCCCTAGGCA CAGGTGGCTA AGAGAGTTAG TCAAAGCGCT TGCCGAAGAG
TTACCAATGC TAAACTAG
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| Protein sequence | MGETDYLALD GRLLRLFLTV FDTGSVSGAA DKLDLNQSTV SNGLDRLRRI IGEPLFVRSG
RGIIPTQEAS RLAPLARELL AKFEQFVEAQ EYRAEDESRP FVIAANDYER DILLPQLLVK
LRLLAPNAPL KVLTAGAKET VLEQLRQGEI DLVLSPSIEA NVDDLKQQWL FSDCDAVFYD
PEVIKGPIDL AQYVALPHAR VVFNYSGRSE IDEVLTGLKL EREIKLEVAN FSALSSMMRG
SELVTTLPSR VGISLLDKMA QQTPPISLND INIYQFWHQA YTHSPRHRWL RELVKALAEE
LPMLN
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