| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1117 |
|---|
| Symbol | |
|---|
| ID | 6115351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1436741 |
|---|
| End bp | 1437808 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641632600 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001759505 |
|---|
| Protein GI | 170725479 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.171851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC CATTAAACTC ACTTGCAATC ATCACCTCCC AGCTCTTCGC GGCTGGAGCT
TCAGCCCATA ACATTCATGA TATCAAGTTC AAACCTGATG GCGGTTACAC CTCAACCGTA
GGCGCGAAAT ATCAAGCGCC AAACAGTCAG GTAAATATCT CTGCTGATGT GAAAATAGAT
AAGCTGTTTG AACGAAACAT GGCTGGAGAG ACTCTCGTTC AGCGCATTAC AGATAGGGTT
TACTGGGTGC AAAATCACTT CTATAACAGC CTTTTCTTTG TCGGTGACAA GGGTGTTATG
GTATTAGATC CCCTAGCCTA TGGCGCAGGA AGAGCCCTGC TTTCGGCCAT AAAACAGGTG
ACAGATAAAC CTGTCACCAC CTTGGTCTAC TCCCATAATC ACGCAGACCA TATTGGTGAT
GCTGAGGTTT TTGTTGCTGA AGCAAAACGC CAAAAAGTGG ATCTCACCAT CTTGTCCAGT
GATGCTACCG CCGACAAAAT GAAGCGACTC AATAGCCAAC TTCCTCGTCC AACTAAGACT
GTCGATTTCA ATGATGGTGT CTATCAATTT GAAGATACAC GGCTTAAGTT TATCGGCTTT
GAACATGCTG CACACACTGA CGACTCTGCC GCACTGCTGC TTGTCGATGA AGGGGTGATA
CACACACCGG ATCTTATCAA TCCAGATCAA CTGCCTTGGC TAGGATTTGG CGGCTCGGAA
AACTTCACCT ACTACAGGCA GAATTTAGCT AAAGTCTCGG CTCAAAAGTG GCAGTACCTT
TCTGGTGGAC ATGGCAATAT AGGCAGTCGA GCCGATCTCG ACTTTATGCA GCACTATCTC
ACCGATCTCA ACCTTGCGGC AAACAGAGCC ATGAACAGGA CTGATTGGGC CGAGTTCACC
ACAGTGGAGA ATAACAACCA CGCGGTATTT GGCGCCAAGT GGTTTGAAGC TGCCAGTCAA
GATATCACCA ATACCTTAAG ACCTAAATAT GGTCACTATT ATGGCTTCGA AGCATCCGTA
CCTAAACAGG CTGAGCTTGT TCTCGATACC TTACTCTCCT ACCAATAG
|
|---|
| Protein sequence | MKHPLNSLAI ITSQLFAAGA SAHNIHDIKF KPDGGYTSTV GAKYQAPNSQ VNISADVKID
KLFERNMAGE TLVQRITDRV YWVQNHFYNS LFFVGDKGVM VLDPLAYGAG RALLSAIKQV
TDKPVTTLVY SHNHADHIGD AEVFVAEAKR QKVDLTILSS DATADKMKRL NSQLPRPTKT
VDFNDGVYQF EDTRLKFIGF EHAAHTDDSA ALLLVDEGVI HTPDLINPDQ LPWLGFGGSE
NFTYYRQNLA KVSAQKWQYL SGGHGNIGSR ADLDFMQHYL TDLNLAANRA MNRTDWAEFT
TVENNNHAVF GAKWFEAASQ DITNTLRPKY GHYYGFEASV PKQAELVLDT LLSYQ
|
|---|
| |