| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1098 |
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| Symbol | |
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| ID | 6115332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1416485 |
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| End bp | 1417264 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632581 |
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| Product | ROK family protein |
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| Protein accession | YP_001759486 |
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| Protein GI | 170725460 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0070439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG TAACGGTCGA TATCGGTGGC AGCAAAGCAC TCTTTGAGAT GCATTTTGAT
GGGCGAACCG AGCAGTATAA AATTCCAACC GGCGAACATT TCAATATAGA TAGTCTCAAC
CAACAACTTC AGGAGTTGGA GTCAGATTAT GGTTTTAAAG ATTACCGTTT AGCCATCGCA
CTGCCTGGTC TAGTTCAGGA TAACCAGCTG CTTTCGAGTA AATCTCTTAT CGGGTTAAAT
GGTCTATCTA AGAGTGATAT CAACACTCAA GCTCAAACAG TATTGATCGT CAATGATATT
GATGCGGGCA TGCAGGCCGT TACTGATAGC AGGCATGATT GTGAACTGCT AGTGATGTGC
GGTACTGGGA TTGGTATGGC TATCTCAATT AATGGCAAGC TATTTACTGG TGCTCACGGT
CTGGCGGGAG AGTTAGGTCA CTGCCGAGTA ATGACTGAGT CGGGAGAGTT TAGTCTGGAG
CAGTTGGCAA GTGGCGGTTC CATTCAAACT CGTGAGATAA AGTCTCAGGC TGATCTATTT
CGTGCAGGAA GTTATTTAGG CATGGGGATG GCTTGGGCCG TTAACCTGTT TAACCCTAAT
CGTATCTGGC TAGCCGGTGG CATGATGAAT AATGCCGATT ACTATCGAGG TTGCATCTCA
GCCCTGAATG AGATGGCGCT AACAGCCCCA CTTTCACAAG CTAAAGTTGC AAGGGTCGAC
GACATGGAGA CTATAGTTTG TCGAGGGCTA AAAGTGATGT TAGATAGAAG CTGTAATTAA
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| Protein sequence | MQTVTVDIGG SKALFEMHFD GRTEQYKIPT GEHFNIDSLN QQLQELESDY GFKDYRLAIA
LPGLVQDNQL LSSKSLIGLN GLSKSDINTQ AQTVLIVNDI DAGMQAVTDS RHDCELLVMC
GTGIGMAISI NGKLFTGAHG LAGELGHCRV MTESGEFSLE QLASGGSIQT REIKSQADLF
RAGSYLGMGM AWAVNLFNPN RIWLAGGMMN NADYYRGCIS ALNEMALTAP LSQAKVARVD
DMETIVCRGL KVMLDRSCN
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